RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 RUBCNQ92622 972 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SLITRK1Q96PX8 696 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 KCNK16Q96T55 309 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 ECT2Q9H8V3 914 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 APOBEC3GQ9HC16 384 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 DMAP1Q9NPF5 467 aaPredicted RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 KRT82Q9NSB4 513 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 C2orf42Q9NWW7 574 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 DUS2Q9NX74 493 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 WNT6Q9Y6F9 365 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 ANAPC1Q9H1A4 1944 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 FAM92AA1XBS5 289 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 LEFTY2O00292 366 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 AP1G2O75843 785 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 RTN3O95197 1032 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 CCDC130P13994 396 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 GCLMP48507 274 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 SLC5A3P53794 718 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 AMPD2Q01433 879 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 DMWDQ09019 674 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 ORC1Q13415 861 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 ADAM9Q13443 819 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 ACOT1Q86TX2 421 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 ZC3H3Q8IXZ2 948 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 CRYBG2Q8N1P7 616 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 ZMIZ2Q8NF64 920 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 SPATA20Q8TB22 786 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 SMOQ99835 787 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 MED10Q9BTT4 135 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 IMPG2Q9BZV3 1241 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 NIF3L1Q9GZT8 377 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 RNF38Q9H0F5 515 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 TMEM8AQ9HCN3 771 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 CPQQ9Y646 472 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
HMGXB3-205ENST00000514469 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 NFATC1O95644 943 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 EGFP01133 1207 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 ZDHHC11BP0C7U3 371 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 DRD1P21728 446 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 YWHAQP27348 245 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 HOXA6P31267 233 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 GTF2H1P32780 548 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 TUBP50607 506 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 IFRD2Q12894 506 aaPredicted RBP11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 SNX30Q5VWJ9 437 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 SCAMP5Q8TAC9 235 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 SLC2A14Q8TDB8 520 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 FBXO32Q969P5 355 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 GSDMAQ96QA5 445 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 P2RY13Q9BPV8 354 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 HINFPQ9BQA5 517 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 FBRSL1Q9HCM7 1045 aaKnown RBP11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 FAM49BQ9NUQ9 324 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
HMGXB3-205ENST00000514469 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 KIAA1549LQ6ZVL6 1849 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 GOLGA6L4A6NEF3 574 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 CHURC1-FNTBB4DL54 471 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 SLC16A3O15427 465 aaKnown RBP11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 RNF40O75150 1001 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 CILPO75339 1184 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 BEST1O76090 585 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 PRCPP42785 496 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 FNTBP49356 437 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 MXI1P50539 228 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 GALK1P51570 392 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 FBXO43Q4G163 708 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 KRT39Q6A163 491 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 CLEC20AQ6ZU45 233 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 FILIP1Q7Z7B0 1213 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 WDR5BQ86VZ2 330 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 DDX42Q86XP3 938 aaKnown RBP eCLIP11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 KIAA2013Q8IYS2 634 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 DCLK2Q8N568 766 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 WHAMMQ8TF30 809 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 EZH1Q92800 747 aaPredicted RBP11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 CD101Q93033 1021 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms