RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	MOGAT1	Q96PD6	335 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	AS3MT	Q9HBK9	375 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	OBP2B	Q9NPH6	170 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLAMF7	Q9NQ25	335 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FBXO34	Q9NWN3	711 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KCTD5	Q9NXV2	234 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC17A6	Q9P2U8	582 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CAPN11	Q9UMQ6	739 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MAP3K2	Q9Y2U5	619 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TMX2	Q9Y320	296 aa		4.01	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CCDC180	Q9P1Z9	1646 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TCRBV7S2A1N4T	A0A589	114 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FAM234B	A2RU67	622 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CDHR4	A6H8M9	788 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	LGALS16	A8MUM7	142 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CCP110	O43303	1012 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PROP1	O75360	226 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	A1BG	P04217	495 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GRP	P07492	148 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PIM1	P11309	404 aa	Predicted RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KCNA2	P16389	499 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GABRB3	P28472	473 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	VIPR2	P41587	438 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	DDX10	Q13206	875 aa	Known RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	EFR3A	Q14156	821 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HLX	Q14774	488 aa	Predicted RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RAB30	Q15771	203 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	INTS11	Q5TA45	600 aa	Known RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	DCAF12L1	Q5VU92	463 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FAM160B1	Q5W0V3	765 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GGT6	Q6P531	493 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MZT2A	Q6P582	158 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RD3	Q7Z3Z2	195 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GPR149	Q86SP6	731 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TICAM2	Q86XR7	235 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC44A3	Q8N4M1	653 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ATG16L2	Q8NAA4	619 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PPHLN1	Q8NEY8	458 aa	Known RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	OR56A3	Q8NH54	315 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ACTRT2	Q8TDY3	377 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	C18orf8	Q96DM3	657 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PGBD1	Q96JS3	809 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SNX27	Q96L92	541 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	UBXN10	Q96LJ8	280 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267		Q96MF0	132 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MYOC	Q99972	504 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZSWIM1	Q9BR11	485 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	AIFM2	Q9BRQ8	373 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SPATA5L1	Q9BVQ7	753 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TEX101	Q9BY14	249 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FAM83D	Q9H4H8	585 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZHX3	Q9H4I2	956 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GSTO2	Q9H4Y5	243 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	XPNPEP3	Q9NQH7	507 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	INTS13	Q9NVM9	706 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RGL1	Q9NZL6	768 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	LRFN1	Q9P244	771 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GRHPR	Q9UBQ7	328 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ITGB1BP2	Q9UKP3	347 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CA14	Q9ULX7	337 aa		4	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PRAMEF33	A0A0G2JMD5	474 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CCDC195	A0A1B0GUA6	201 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	LOC102723971	A0A1B0GUV8	181 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZNF785	A8K8V0	405 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KIAA0355	O15063	1070 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	EPB41L2	O43491	1005 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PRAMEF10	O60809	474 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ELANE	P08246	267 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	BTF3	P20290	206 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ACVR2A	P27037	513 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC6A4	P31645	630 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MPL	P40238	635 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FOLR3	P41439	243 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ANXA11	P50995	505 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZNF135	P52742	658 aa	Predicted RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CACNA2D1	P54289	1103 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	UCP3	P55916	312 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MRPS21	P82921	87 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	LMOD3	Q0VAK6	560 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SCAP	Q12770	1279 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZNF169	Q14929	603 aa	Predicted RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	POSTN	Q15063	836 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MAPKAPK3	Q16644	382 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CCDC142	Q17RM4	750 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	WDR78	Q5VTH9	848 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PPP1R32	Q7Z5V6	425 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	USP37	Q86T82	979 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GAS2L3	Q86XJ1	694 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CLASRP	Q8N2M8	674 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MPP5	Q8N3R9	675 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC15A4	Q8N697	577 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SIMC1	Q8NDZ2	872 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SPPL3	Q8TCT6	385 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SMCR8	Q8TEV9	937 aa	Predicted RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SKA1	Q96BD8	255 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CNPPD1	Q9BV87	410 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KATNAL1	Q9BW62	490 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	STK31	Q9BXU1	1019 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms