RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 C1orf127Q8N9H9 656 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 FGD4Q96M96 766 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 TWNKQ96RR1 684 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 SDCBP2Q9H190 292 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 PTPRHQ9HD43 1115 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 SIX4Q9UIU6 781 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 AGAP1Q9UPQ3 857 aa13.15□□□□□ -0.31
SDHA-216ENST00000514027 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.31
SDHA-216ENST00000514027 ANK1P16157 1881 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 PAPPA2Q9BXP8 1791 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 EVPLQ92817 2033 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 KRT7P08729 469 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 IQCF3P0C7M6 154 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 GCAP28676 217 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 PTPN7P35236 360 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 RAD23BP54727 409 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 HIF1AQ16665 826 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 Q3C1V9 767 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 POLNQ7Z5Q5 900 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 RIBC1Q8N443 379 aaPredicted RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 ARFGAP1Q8N6T3 406 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 RSAD2Q8WXG1 361 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
SDHA-216ENST00000514027 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 MAGEB18Q96M61 343 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 FZD8Q9H461 694 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 PDGFCQ9NRA1 345 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 SHOC2Q9UQ13 582 aa13.14□□□□□ -0.31
SDHA-216ENST00000514027 A0A0G2JLL6 359 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 LACTBL1A8MY62 500 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 GPR25O00155 361 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 PIAS1O75925 651 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 IL18RAPO95256 599 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 SLC25A27O95847 323 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 IL9RQ01113 521 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 TAF5Q15542 800 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 PRRT2Q7Z6L0 340 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 XYLT1Q86Y38 959 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 MAML1Q92585 1016 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 RNPEPQ9H4A4 650 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 TRABDQ9H4I3 376 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 A8MUI8 341 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 MICAL2O94851 1124 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 KDELR1P24390 212 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 NCALDP61601 193 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 EFTUD2Q15029 972 aaKnown RBP eCLIP13.13□□□□□ -0.31
SDHA-216ENST00000514027 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
SDHA-216ENST00000514027 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 SLC4A11Q8NBS3 891 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 SLC35B2Q8TB61 432 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 BCO2Q9BYV7 579 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 LHX5Q9H2C1 402 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 AKT3Q9Y243 479 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 ARL2BPQ9Y2Y0 163 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
SDHA-216ENST00000514027 HBP1O60381 514 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 FOXN2P32314 431 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 POLE2P56282 527 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 UBA3Q8TBC4 463 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 PITPNM3Q9BZ71 974 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 TNFSF13BQ9Y275 285 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 PCNTO95613 3336 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 A0A087WZ62 844 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
SDHA-216ENST00000514027 MIPP30301 263 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 PHKA2P46019 1235 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms