RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
PTPN20-229ENST00000513756 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
PTPN20-229ENST00000513756 A0A087WV48 116 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 IGHV1OR15-9A0A0B4J2B8 117 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 K7ENM7 598 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 GABRG2P18507 467 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 PCSK1P29120 753 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 PRPHP41219 470 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 MAGEA11P43364 429 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 LHX1P48742 406 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 ACOT2P49753 483 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SLC12A3P55017 1021 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SLC7A9P82251 487 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 ZXDBP98169 803 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 WDR45BQ5MNZ6 344 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 NT5DC4Q86YG4 428 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 ZNF513Q8N8E2 541 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
PTPN20-229ENST00000513756 ZNF419Q96HQ0 510 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-229ENST00000513756 SPATA17Q96L03 361 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 MMTAG2Q9BU76 263 aaKnown RBP12.91□□□□□ -0.34
PTPN20-229ENST00000513756 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
PTPN20-229ENST00000513756 PTPRBP23467 1997 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 IL18RAPO95256 599 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 HOXB2P14652 356 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
PTPN20-229ENST00000513756 NTSR1P30989 418 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 GAD2Q05329 585 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 MESP2Q0VG99 397 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 GRIK2Q13002 908 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 HYIQ5T013 277 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 SDE2Q6IQ49 451 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 MYCT1Q8N699 235 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 CDK5RAP3Q96JB5 506 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 CDC6Q99741 560 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 ZDHHC4Q9NPG8 344 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
PTPN20-229ENST00000513756 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 CPQQ9Y646 472 aa12.9□□□□□ -0.34
PTPN20-229ENST00000513756 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
PTPN20-229ENST00000513756 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 ANXA13P27216 316 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 ABCG1P45844 678 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 ANAPC15P60006 121 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 DENND5BQ6ZUT9 1274 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
PTPN20-229ENST00000513756 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 CFAP97Q9P2B7 532 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 DEC1Q9P2X7 70 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-229ENST00000513756 CYP8B1Q9UNU6 501 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 SHROOM3Q8TF72 1996 aa12.89□□□□□ -0.35
PTPN20-229ENST00000513756 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 ZNF840PA6NDX5 716 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 TRABD2BA6NFA1 517 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 FAM13AO94988 1023 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 CER1O95813 267 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 PRB1P04280 392 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
PTPN20-229ENST00000513756 GRIK1P39086 918 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 MAPRE1Q15691 268 aaKnown RBP12.88□□□□□ -0.35
PTPN20-229ENST00000513756 IL17AQ16552 155 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 IL27RAQ6UWB1 636 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 PHTF2Q8N3S3 785 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
PTPN20-229ENST00000513756 LSM14AQ8ND56 463 aaKnown RBP12.88□□□□□ -0.35
PTPN20-229ENST00000513756 FBXO18Q8NFZ0 1043 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 RNF38Q9H0F5 515 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 SMPD4Q9NXE4 827 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 GDAP2Q9NXN4 497 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
PTPN20-229ENST00000513756 TENM4Q6N022 2769 aa12.87□□□□□ -0.35
PTPN20-229ENST00000513756 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
PTPN20-229ENST00000513756 A0A1W2PQF6 199 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms