RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 THG1LQ9NWX6 298 aaKnown RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 ARMCX3Q9UH62 379 aaPredicted RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 MRPS17Q9Y2R5 130 aaKnown RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 TNFRSF10BO14763 440 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 STX10O60499 249 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CILPO75339 1184 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 YWHAQP27348 245 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 SLC5A3P53794 718 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 MAP3K7CLP57077 242 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 LRMPQ12912 555 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 USP4Q13107 963 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 MTF1Q14872 753 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 PON2Q15165 354 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 ZNF77Q15935 545 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 ITPRIPL2Q3MIP1 535 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CCDC40Q4G0X9 1142 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
RNF4-215ENST00000511843 GPRIN1Q7Z2K8 1008 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CCDC150Q8NCX0 1101 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 FBXO32Q969P5 355 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 SLC35C1Q96A29 364 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CHFRQ96EP1 664 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 NT5C1AQ9BXI3 368 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
RNF4-215ENST00000511843 KIF9Q9HAQ2 790 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 LMAN1LQ9HAT1 526 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 GMIPQ9P107 970 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 CHORDC1Q9UHD1 332 aaPredicted RBP14.09□□□□□ -0.15
RNF4-215ENST00000511843 ZMYM5Q9UJ78 669 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 R4GN57 208 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 USP34Q70CQ2 3546 aa14.09□□□□□ -0.15
RNF4-215ENST00000511843 PGFP49763 221 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 PLCB2Q00722 1185 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 MTAPQ13126 283 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 RUNX3Q13761 415 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.16
RNF4-215ENST00000511843 CC2D1AQ6P1N0 951 aaPredicted RBP14.08□□□□□ -0.16
RNF4-215ENST00000511843 TSSK4Q6SA08 328 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 NELL2Q99435 816 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 IRF2BPLQ9H1B7 796 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 CISHQ9NSE2 258 aa14.08□□□□□ -0.16
RNF4-215ENST00000511843 SOBPA7XYQ1 873 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 NCAM2O15394 837 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 RTN3O95197 1032 aaPredicted RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 OAS1P00973 400 aaKnown RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 FAM200BP0CF97 657 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 SP9P0CG40 484 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 CHRNB1P11230 501 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 NBL1P41271 181 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 FMO5P49326 533 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 PAK1Q13153 545 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 GAS6Q14393 721 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 PPP1R26Q5T8A7 1209 aaPredicted RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 Q6ZS52 159 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 CLEC20AQ6ZU45 233 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 FILIP1Q7Z7B0 1213 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 RALGPS2Q86X27 583 aaPredicted RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 CEP63Q96MT8 703 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 C8orf33Q9H7E9 229 aaPredicted RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 CCSER2Q9H7U1 834 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 CSNK1G1Q9HCP0 422 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
RNF4-215ENST00000511843 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 KIAA1468Q9P260 1216 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 ARHGAP26Q9UNA1 814 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 COQ4Q9Y3A0 265 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 CPQQ9Y646 472 aa14.07□□□□□ -0.16
RNF4-215ENST00000511843 MYO15AQ9UKN7 3530 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 HHLA1C9JL84 531 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 LEFTY2O00292 366 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 CYP26A1O43174 497 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 COCHO43405 550 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 MBL2P11226 248 aaPredicted RBP14.06□□□□□ -0.16
RNF4-215ENST00000511843 HOXC13P31276 330 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 PPP1R2P41236 205 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 RPS9P46781 194 aaKnown RBP14.06□□□□□ -0.16
RNF4-215ENST00000511843 IFNAR2P48551 515 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 RAD23BP54727 409 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 CSTF1Q05048 431 aaKnown RBP14.06□□□□□ -0.16
RNF4-215ENST00000511843 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
RNF4-215ENST00000511843 SRRTQ9BXP5 876 aaKnown RBP14.06□□□□□ -0.16
RNF4-215ENST00000511843 CHRDQ9H2X0 955 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 CFAP97Q9P2B7 532 aa14.06□□□□□ -0.16
RNF4-215ENST00000511843 BICDL2A1A5D9 508 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 GFRA3O60609 400 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 OLFM2O95897 454 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 CALCAP01258 141 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 SLC7A9P82251 487 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms