RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SUMF1Q8NBK3 374 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 SCARF2Q96GP6 870 aaPredicted RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 NAP1L4Q99733 375 aaKnown RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 DDX23Q9BUQ8 820 aaKnown RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 KIFC3Q9BVG8 833 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 FZD8Q9H461 694 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 PCDHA12Q9UN75 941 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 KANSL1LA0AUZ9 987 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 BTBD18B2RXH4 712 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 C9orf172C9J069 976 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 I3L4J1 428 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 EPB41L2O43491 1005 aaKnown RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 NEMFO60524 1076 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 JAK2O60674 1132 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 MED24O75448 989 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 CST3P01034 146 aaPredicted RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 HNRNPA1P09651 372 aaKnown RBP eCLIP7.3□□□□□ -1.24
COPS4-209ENST00000511653 XBP1P17861 261 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 INSM1Q01101 510 aaPredicted RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 UBXN2BQ14CS0 331 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 MLF2Q15773 248 aaPredicted RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 SLC5A9Q2M3M2 681 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 GLRA4Q5JXX5 417 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 PPM1LQ5SGD2 360 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 AXDND1Q5T1B0 1012 aaPredicted RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 TDRD10Q5VZ19 366 aaKnown RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 CD300LGQ6UXG3 332 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 DGLUCYQ7Z3D6 616 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 PHACTR4Q8IZ21 702 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 RUBCNQ92622 972 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 MTMR9Q96QG7 549 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 CCDC113Q9H0I3 377 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 SEMA4AQ9H3S1 761 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 GOLGA2P5Q9HBQ8 144 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 POLD4Q9HCU8 107 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 PRMT7Q9NVM4 692 aaPredicted RBP7.3□□□□□ -1.24
COPS4-209ENST00000511653 GDAQ9Y2T3 454 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 SPEGQ15772 3267 aa7.3□□□□□ -1.24
COPS4-209ENST00000511653 SHISA7A6NL88 538 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 SART1O43290 800 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 PRKCBP05771 671 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 THP07101 528 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 CEBPBP17676 345 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 TKTP29401 623 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 HOXA9P31269 272 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 OR1D2P34982 312 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 ST3GAL1Q11201 340 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 FAM187BQ17R55 369 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 PABPC1LQ4VXU2 614 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 ZC3H14Q6PJT7 736 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 MTSS1LQ765P7 747 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 CATSPER3Q86XQ3 398 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 DIS3L2Q8IYB7 885 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 LILRB2Q8N423 598 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 NSUN7Q8NE18 718 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 GTF3C6Q969F1 213 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 SLC6A18Q96N87 628 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 PLA2G2FQ9BZM2 168 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 SSU72Q9NP77 194 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 LTB4R2Q9NPC1 389 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 SPATA6Q9NWH7 488 aaPredicted RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 DNMT3BQ9UBC3 853 aaKnown RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 MTRRQ9UBK8 725 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 CDY1Q9Y6F8 540 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 ZFP37Q9Y6Q3 630 aaPredicted RBP7.29□□□□□ -1.24
COPS4-209ENST00000511653 TSC2P49815 1807 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 PKD1L2Q7Z442 2459 aa7.29□□□□□ -1.24
COPS4-209ENST00000511653 TLDC2A0PJX2 215 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 RGS13O14921 159 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 N4BP3O15049 544 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 BRCC3P46736 316 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 CLCNKBP51801 687 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 PRKCQQ04759 706 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 PRPF4BQ13523 1007 aaKnown RBP7.28□□□□□ -1.24
COPS4-209ENST00000511653 FXNQ16595 210 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 ME3Q16798 604 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 SLC44A4Q53GD3 710 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 TSSK4Q6SA08 328 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 TPRG1Q6ZUI0 275 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 CD163Q86VB7 1156 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 ZBTB8OSQ8IWT0 167 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 MCPH1Q8NEM0 835 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 PPP1R10Q96QC0 940 aaKnown RBP7.28□□□□□ -1.24
COPS4-209ENST00000511653 DNAJC7Q99615 494 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 HEBP1Q9NRV9 189 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 C1GALT1Q9NS00 363 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 DLL3Q9NYJ7 618 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 PCOLCE2Q9UKZ9 415 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 LAMA5O15230 3695 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 NUP210Q8TEM1 1887 aaPredicted RBP7.28□□□□□ -1.24
COPS4-209ENST00000511653 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
COPS4-209ENST00000511653 EML5Q05BV3 1969 aa7.28□□□□□ -1.24
COPS4-209ENST00000511653 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms