RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 MAB21L3Q8N8X9 362 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 RBBP8NLQ8NC74 664 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 PDZD8Q8NEN9 1154 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 SCAMP5Q8TAC9 235 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 OVCA2Q8WZ82 227 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 FBXO32Q969P5 355 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 KXD1Q9BQD3 176 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TRMT61BQ9BVS5 477 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 PLA2G2FQ9BZM2 168 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 SMOC2Q9H3U7 446 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TSPY26PQ9H489 355 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 GRPEL1Q9HAV7 217 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 SLC2A4RGQ9NR83 387 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TDP1Q9NUW8 608 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 OBP2AQ9NY56 170 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 IL37Q9NZH6 218 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TSPAN16Q9UKR8 245 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 NCANO14594 1321 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 FAM92AA1XBS5 289 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ZNF840PA6NDX5 716 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TMEM221A6NGB7 291 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 HEPACAM2A8MVW5 462 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 M0R296 226 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 O00370 1275 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ZNF263O14978 683 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 MED7O43513 233 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 NARSO43776 548 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 GPR37L1O60883 481 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 PRAMEF12O95522 483 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ABL1P00519 1130 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 CFHP08603 1231 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 USP17L7P0C7H9 530 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 PSMC3P17980 439 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 HDCP19113 662 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 RFX1P22670 979 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 USP8P40818 1118 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 VIPR2P41587 438 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ZNF132P52740 706 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 BCAT1P54687 386 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 PFKPQ01813 784 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 APBA1Q02410 837 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 PDE4CQ08493 712 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 BST2Q10589 180 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 GOLGA7BQ2TAP0 167 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TMEM31Q5JXX7 168 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 KLHDC7AQ5VTJ3 777 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 SNX30Q5VWJ9 437 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 VITQ6UXI7 678 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 GPIHBP1Q8IV16 184 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 DHX40Q8IX18 779 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 YAF2Q8IY57 180 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ARL14EPQ8N8R7 260 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 BPIFB1Q8TDL5 484 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 DEPDC1BQ8WUY9 529 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TFAP2BQ92481 460 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 SHC3Q92529 594 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ANP32BQ92688 251 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 CYP2S1Q96SQ9 504 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 HSD3B7Q9H2F3 369 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TRPC7Q9HCX4 862 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 SIX2Q9NPC8 291 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 PLCB1Q9NQ66 1216 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 TLR8Q9NR97 1041 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 THG1LQ9NWX6 298 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 WNT16Q9UBV4 365 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 CHORDC1Q9UHD1 332 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 DNAJC12Q9UKB3 198 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 SCML2Q9UQR0 700 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 DOCK8Q8NF50 2099 aa7.55□□□□□ -1.2
PDLIM5-215ENST00000511586 NCOR1O75376 2440 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 C2orf78A6NCI8 922 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 FAM86C2PA6NEL3 165 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 LGALS16A8MUM7 142 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 XPO1O14980 1071 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 THAP12O43422 761 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 CKMP06732 381 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 SETSIPP0DME0 302 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 ATP1A3P13637 1013 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 UCHL3P15374 230 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 GNA15P30679 374 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 GDI1P31150 447 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 TUBP50607 506 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 KIF11P52732 1056 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 TPM4P67936 248 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 UBXN1Q04323 297 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 PTK2Q05397 1052 aa7.54□□□□□ -1.2
PDLIM5-215ENST00000511586 RAPGEF1Q13905 1077 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms