RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 EGR2P11161 476 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 MAKP20794 623 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 GABRB3P28472 473 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CHKAP35790 457 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 GDF5P43026 501 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 PGDP52209 483 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 NXPH1P58417 271 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZRSR2Q15696 482 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 RAB30Q15771 203 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 TBCCQ15814 346 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 FNDC7Q5VTL7 733 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 MZT2AQ6P582 158 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 USP17L6PQ6QN14 398 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 RHOUQ7L0Q8 258 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCDC28AQ8IWP9 274 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 ABRAQ8N0Z2 381 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 LNX2Q8N448 690 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAM109AQ8N4B1 249 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 ATG16L2Q8NAA4 619 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCT6BQ92526 530 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CAVIN3Q969G5 261 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 FKBP10Q96AY3 582 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 PGBD1Q96JS3 809 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 HIST1H2AAQ96QV6 131 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 C17orf80Q9BSJ5 609 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC25A32Q9H2D1 315 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLITRK6Q9H5Y7 841 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CYP4F11Q9HBI6 524 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 KCTD5Q9NXV2 234 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 LRFN1Q9P244 771 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 DNAJB11Q9UBS4 358 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCNL1Q9UK58 526 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SNX14Q9Y5W7 946 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 hCG_1642624A0A1W2PR95 340 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 PIP5K1BO14986 540 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 CCNT2O60583 730 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 TLR5O60602 858 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZNF202O95125 648 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 VNN1O95497 513 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 SLPIP03973 132 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 FESP07332 822 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 SRGAP2BP0DMP2 458 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 EPHA3P29320 983 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 NTSR1P30989 418 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 UQCRC1P31930 480 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZEB1P37275 1124 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 CLCN2P51788 898 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 BCAT1P54687 386 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 PDE1AP54750 535 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 SCAPQ12770 1279 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 GPS1Q13098 491 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 BLMHQ13867 455 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 DHX8Q14562 1220 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 LY6KQ17RY6 165 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 ARHGAP15Q53QZ3 475 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 MANEALQ5VSG8 457 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 RAP1GAP2Q684P5 730 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 SLC9A4Q6AI14 798 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 MRNIPQ6NTE8 343 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 ERAP2Q6P179 960 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 VWA1Q6PCB0 445 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 USP51Q70EK9 711 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 IZUMO1Q8IYV9 350 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 AMER2Q8N7J2 671 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 SUPT20HQ8NEM7 779 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 CYP2W1Q8TAV3 490 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 XAGE5Q8WWM1 108 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 TFAP2BQ92481 460 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 GLG1Q92896 1179 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 FUBP1Q96AE4 644 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 GRAMD1AQ96CP6 724 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 R3HDM4Q96D70 268 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZNF668Q96K58 619 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 DPCDQ9BVM2 203 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 CHMP4AQ9BY43 222 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 TMOD4Q9NZQ9 345 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 RGS17Q9UGC6 210 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 CAPN11Q9UMQ6 739 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 HS3ST4Q9Y661 456 aa4.02□□□□□ -1.77
TRAPPC11-207ENST00000511409 LOC102724159A0A0B4J2E5 919 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 A1L4Q6 167 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 GOLGA6L3A6NEY3 463 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 AQP12BA6NM10 295 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 PSMD9O00233 223 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 SLC16A3O15427 465 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 USP1O94782 785 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 CSTBP04080 98 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ERBB2P04626 1255 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ADH4P08319 380 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 HKR1P10072 659 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 NR2F6P10588 404 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 PECAM1P16284 738 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 EGR1P18146 543 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 MCM7P33993 719 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms