RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 ZBED1O96006 694 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 SDCCAG8Q86SQ7 713 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CCNYQ8ND76 341 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 KIF18AQ8NI77 898 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MYCBPAPQ8TBZ2 947 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CINPQ9BW66 212 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CERS4Q9HA82 394 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 GPRC5CQ9NQ84 441 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MYH1P12882 1939 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 LARGE1O95461 756 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 STAMBPO95630 424 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MYBP10242 640 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF132P52740 706 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 SNRPD1P62314 119 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 DNAJC21Q5F1R6 531 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ZBTB41Q5SVQ8 909 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CYP2W1Q8TAV3 490 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 BSNDQ8WZ55 320 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 C8orf48Q96LL4 319 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM126AQ9BYI3 521 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC2A4RGQ9NR83 387 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 NCKIPSDQ9NZQ3 722 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MOSPD1Q9UJG1 213 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ADCY5O95622 1261 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 PRNPP04156 253 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 KRT1P04264 644 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ELP6Q0PNE2 266 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 TWF1Q12792 350 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 DPYDQ12882 1025 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 EIF4HQ15056 248 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 PDK2Q15119 407 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CNGA2Q16280 664 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 P3H1Q32P28 736 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 AARS2Q5JTZ9 985 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MAATS1Q7Z4T9 603 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 TRIM48Q8IWZ4 208 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 FLCNQ8NFG4 579 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CXorf38Q8TB03 319 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 RAB17Q9H0T7 212 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 STXBP5LQ9Y2K9 1186 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 STARD13Q9Y3M8 1113 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 DOCK2Q92608 1830 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 DLEC1Q9Y238 1755 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF839A8K0R7 811 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CNR2P34972 360 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 CEP112Q8N8E3 955 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 PARD3BQ8TEW8 1205 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 HAS1Q92839 578 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 SPATA6Q9NWH7 488 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 TTLL3Q9Y4R7 772 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 YIPF1Q9Y548 306 aa10.1□□□□□ -0.79
POLR2J3-215ENST00000511313 KIF13BQ9NQT8 1826 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PYGMP11217 842 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 TKTL1P51854 596 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 THOP1P52888 689 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 DSG1Q02413 1049 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 EFEMP1Q12805 493 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 C6orf163Q5TEZ5 329 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SERPINA13PQ6UXR4 307 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PCGF5Q86SE9 256 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SRRM1Q8IYB3 904 aaKnown RBP10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SMARCD2Q92925 531 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PPP1R13BQ96KQ4 1090 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM161BQ96MY7 647 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 CNOT8Q9UFF9 292 aaKnown RBP10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 VPS28Q9UK41 221 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 JRKLQ9Y4A0 524 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 CCDC195A0A1B0GUA6 201 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 CTAGE9A4FU28 777 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PPP1R11O60927 126 aaPredicted RBP10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 POU2F2P09086 479 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC11A1P49279 550 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SUOXP51687 545 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF131P52739 623 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 KIRREL3Q8IZU9 778 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 B3GALNT2Q8NCR0 500 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 SORCS3Q9UPU3 1222 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 RPN2P04844 631 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 AP1B1Q10567 949 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 TDGQ13569 410 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM173BQ6P4H8 233 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 VPS39Q96JC1 886 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 PLCB1Q9NQ66 1216 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 DOCK1Q14185 1865 aa10.09□□□□□ -0.79
POLR2J3-215ENST00000511313 XPO1O14980 1071 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-215ENST00000511313 CCL16O15467 120 aa10.08□□□□□ -0.8
POLR2J3-215ENST00000511313 PDGFRAP16234 1089 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms