RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
TRIO-217ENST00000511019 CHORDC1Q9UHD1 332 aaPredicted RBP8.88□□□□□ -0.99
TRIO-217ENST00000511019 CPQQ9Y646 472 aa8.88□□□□□ -0.99
TRIO-217ENST00000511019 A0A0A0MRY4 1105 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CLDN5O00501 218 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CUTAO60888 179 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 RTN3O95197 1032 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 STAU1O95793 577 aaKnown RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 APODP05090 189 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 MBL2P11226 248 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 CYP2J2P51589 502 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 MYL6P60660 151 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 ASIC1P78348 528 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 SHC2P98077 582 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CYP24A1Q07973 514 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 IFRD2Q12894 506 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 BYSLQ13895 437 aaKnown RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 HSF5Q4G112 596 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 EOGTQ5NDL2 527 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 FAM26FQ5R3K3 315 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 BTBD8Q5XKL5 378 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 TCEAL6Q6IPX3 200 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CNNM4Q6P4Q7 775 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 RHBDF2Q6PJF5 856 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 EPM2AIP1Q7L775 607 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 RASSF3Q86WH2 238 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 DDX42Q86XP3 938 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIO-217ENST00000511019 NELFCDQ8IXH7 590 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 PDZD8Q8NEN9 1154 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 TCEAL3Q969E4 200 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 SYAP1Q96A49 352 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 CNOT6LQ96LI5 555 aaKnown RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 CGRRF1Q99675 332 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 EDEM2Q9BV94 578 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 B3GNT5Q9BYG0 378 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CFAP97Q9P2B7 532 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
TRIO-217ENST00000511019 MMP17Q9ULZ9 603 aa8.87□□□□□ -0.99
TRIO-217ENST00000511019 ZNF292O60281 2723 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ANK1P16157 1881 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 E2F8A0AVK6 867 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TBC1D3BA6NDS4 549 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ANTXRLA6NF34 631 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 SCAMP3O14828 347 aaKnown RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 EXOC3O60645 756 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 CLSTN1O94985 981 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 KAT7O95251 611 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 KLF8O95600 359 aaPredicted RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 OLFM2O95897 454 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ADH1CP00326 375 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 OAS1P00973 400 aaKnown RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 CYP17A1P05093 508 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TIE1P35590 1138 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 EIF2DP41214 584 aaKnown RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 GRIA2P42262 883 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TNFRSF4P43489 277 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 DHPSP49366 369 aaPredicted RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 AP3M2P53677 418 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 CACNA2D1P54289 1103 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 IRX4P78413 519 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 GAD2Q05329 585 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 E2F4Q16254 413 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 GAB4Q2WGN9 574 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 PREPLQ4J6C6 727 aaPredicted RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 HECTD3Q5T447 861 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 EMC10Q5UCC4 262 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 PMS2CLQ68D20 193 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 SHC4Q6S5L8 630 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 UNC13DQ70J99 1090 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 LPCAT2Q7L5N7 544 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ALLCQ8N6M5 410 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 B3GALNT2Q8NCR0 500 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 MDGA1Q8NFP4 955 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 SCFD1Q8WVM8 642 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 OVCA2Q8WZ82 227 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 PIGKQ92643 395 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 OTUB2Q96DC9 234 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TNIP3Q96KP6 325 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 KCNK16Q96T55 309 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 MED10Q9BTT4 135 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ZNF518BQ9C0D4 1074 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 DPEP3Q9H4B8 488 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TMEM9BQ9NQ34 198 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ARHGEF4Q9NR80 690 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 FAM13BQ9NYF5 915 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 CGNQ9P2M7 1197 aaKnown RBP8.86□□□□□ -0.99
TRIO-217ENST00000511019 SH3BP1Q9Y3L3 701 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 NME7Q9Y5B8 376 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 VPS13AQ96RL7 3174 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 TSC2P49815 1807 aa8.86□□□□□ -0.99
TRIO-217ENST00000511019 ATP8B3O60423 1300 aa8.85□□□□□ -0.99
TRIO-217ENST00000511019 PVALEFA0A1B0GWK0 134 aa8.85□□□□□ -0.99
TRIO-217ENST00000511019 SGK1O00141 431 aa8.85□□□□□ -0.99
TRIO-217ENST00000511019 POLR2DO15514 142 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms