RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CALCOCO1Q9P1Z2 691 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 DKK3Q9UBP4 350 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 MAP3K19Q56UN5 1328 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 NT5C1B-RDH14C9J2C7 533 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 F2RL2O00254 374 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 TM4SF1P30408 202 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 SLC16A1P53985 500 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 SSBP2P81877 361 aaPredicted RBP8.32□□□□□ -1.08
USP53-206ENST00000510737 SNAPC2Q13487 334 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 ABCB5Q2M3G0 1257 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 GADL1Q6ZQY3 521 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 BHLHA9Q7RTU4 235 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 NSUN6Q8TEA1 469 aaKnown RBP8.32□□□□□ -1.08
USP53-206ENST00000510737 PBKQ96KB5 322 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 TAF1DQ9H5J8 278 aaPredicted RBP8.32□□□□□ -1.08
USP53-206ENST00000510737 SRP68Q9UHB9 627 aaKnown RBP8.32□□□□□ -1.08
USP53-206ENST00000510737 LTN1O94822 1766 aa8.32□□□□□ -1.08
USP53-206ENST00000510737 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 MAP2P11137 1827 aaKnown RBP8.31□□□□□ -1.08
USP53-206ENST00000510737 A0A0B4J269 797 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 POLRMTO00411 1230 aaKnown RBP8.31□□□□□ -1.08
USP53-206ENST00000510737 URI1O94763 535 aaPredicted RBP8.31□□□□□ -1.08
USP53-206ENST00000510737 AMPHP49418 695 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 DSC2Q02487 901 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 TUBB3Q13509 450 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 CAMKK1Q8N5S9 505 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 SMOQ99835 787 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
USP53-206ENST00000510737 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 NR2F6P10588 404 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 MALP21145 153 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 DRD4P21917 467 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 KIF23Q02241 960 aaPredicted RBP8.3□□□□□ -1.08
USP53-206ENST00000510737 PCBP2Q15366 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP53-206ENST00000510737 KHDC1Q4VXA5 237 aaKnown RBP8.3□□□□□ -1.08
USP53-206ENST00000510737 CCDC93Q567U6 631 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 VGLL2Q8N8G2 317 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 CAPNS2Q96L46 248 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 TEKT5Q96M29 485 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 AMBRA1Q9C0C7 1298 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 FLRT1Q9NZU1 646 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 AGAP1Q9UPQ3 857 aa8.3□□□□□ -1.08
USP53-206ENST00000510737 KLHL33A6NCF5 533 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
USP53-206ENST00000510737 JUPP14923 745 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 TOB1P50616 345 aaPredicted RBP8.29□□□□□ -1.08
USP53-206ENST00000510737 PSMC1P62191 440 aaKnown RBP8.29□□□□□ -1.08
USP53-206ENST00000510737 SRSF7Q16629 238 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP53-206ENST00000510737 TMEM119Q4V9L6 283 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 TAF2Q6P1X5 1199 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 SEMA6DQ8NFY4 1073 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 SCAMP4Q969E2 229 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 SLC12A5Q9H2X9 1139 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 ABT1Q9ULW3 272 aaKnown RBP8.29□□□□□ -1.08
USP53-206ENST00000510737 PADI4Q9UM07 663 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
USP53-206ENST00000510737 LRRC14BA6NHZ5 514 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 F5H697 171 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 TP73O15350 636 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 LATS1O95835 1130 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 ANXA1P04083 346 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 NDUFV1P49821 464 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 GRM1Q13255 1194 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 NECAB2Q7Z6G3 386 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 TPSD1Q9BZJ3 242 aa8.28□□□□□ -1.08
USP53-206ENST00000510737 CCDC8Q9H0W5 538 aaPredicted RBP8.28□□□□□ -1.08
USP53-206ENST00000510737 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.08
USP53-206ENST00000510737 XPOTO43592 962 aaKnown RBP8.27□□□□□ -1.09
USP53-206ENST00000510737 TTLL1O95922 423 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 NHLRC4P0CG21 123 aaPredicted RBP8.27□□□□□ -1.09
USP53-206ENST00000510737 MYBL2P10244 700 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 CHRM3P20309 590 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 EIF2B5Q13144 721 aaKnown RBP8.27□□□□□ -1.09
USP53-206ENST00000510737 LLGL1Q15334 1064 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 FAM153CQ494X1 144 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 ZNF366Q8N895 744 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 PSD4Q8NDX1 1056 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 OSBPL9Q96SU4 736 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 MCM8Q9UJA3 840 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 TRHDEQ9UKU6 1024 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
USP53-206ENST00000510737 USP42Q9H9J4 1324 aaKnown RBP8.27□□□□□ -1.09
USP53-206ENST00000510737 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP53-206ENST00000510737 GJB1P08034 283 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 MAP2K2P36507 400 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 CCT8P50990 548 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 HABP2Q14520 560 aaPredicted RBP8.26□□□□□ -1.09
USP53-206ENST00000510737 RRS1Q15050 365 aaKnown RBP8.26□□□□□ -1.09
USP53-206ENST00000510737 HSP90AB2PQ58FF8 381 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 MTX3Q5HYI7 312 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 SYDE2Q5VT97 1194 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 KIAA1614Q5VZ46 1190 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 CST9Q5W186 159 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms