RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GPAMQ9HCL2 828 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 STK39Q9UEW8 545 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 DBR1Q9UK59 544 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 CACNA1CQ13936 2221 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PID1Q7Z2X4 250 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 PCIF1Q9H4Z3 704 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 ARMC7Q9H6L4 198 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PCDHA6Q9UN73 950 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PCDHA8Q9Y5H6 950 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 SHOX2O60902 331 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 SEC24DO94855 1032 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 MCAMP43121 646 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 KRT33BQ14525 404 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 SNRNP27Q8WVK2 155 aaKnown RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 MYDGFQ969H8 173 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 NBNO60934 754 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PEX3P56589 373 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 OR6B3Q8NGW1 331 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 UBXN6Q9BZV1 441 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 IGSF9BQ9UPX0 1349 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 IFNGR2P38484 337 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 CCR3P51677 355 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 ZNF235Q14590 738 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 SPDYE7PQ495Y7 208 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 LXNQ9BS40 222 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PIK3CDO00329 1044 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 UBOX5O94941 541 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PLEKHA8P1O95397 391 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 CYP2C9P11712 490 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 GALNT15Q8N3T1 639 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 FLCNQ8NFG4 579 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 OXNAD1Q96HP4 312 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 HSPBP1Q9NZL4 362 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 RAB26Q9ULW5 256 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 CLUHO75153 1309 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 ZNF23P17027 643 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 TGM2P21980 687 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 CTTNQ14247 550 aaKnown RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 SNRNP35Q16560 246 aaKnown RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 PACS2Q86VP3 889 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 EXT2Q93063 718 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 UGT2B28Q9BY64 529 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 TASP1Q9H6P5 420 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 RBAKQ9NYW8 714 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 ABL1P00519 1130 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 KIF22Q14807 665 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 TRIM49D1C9J1S8 452 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 AXIN1O15169 862 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 AKAP5P24588 427 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 GMFBP60983 142 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 EPHA7Q15375 998 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 TTLL9Q3SXZ7 439 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 RSBN1Q5VWQ0 802 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 TBC1D10CQ8IV04 446 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 CENPLQ8N0S6 344 aaPredicted RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 C7orf31Q8N865 590 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 VTA1Q9NP79 307 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 IARS2Q9NSE4 1012 aaKnown RBP8.65□□□□□ -1.02
HTT-208ENST00000510626 NAGPAQ9UK23 515 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 MAP3K4Q9Y6R4 1608 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
HTT-208ENST00000510626 SUPT3HB4E1H0 165 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 SORBS3O60504 671 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 RECQL5O94762 991 aaPredicted RBP8.65□□□□□ -1.03
HTT-208ENST00000510626 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.03
HTT-208ENST00000510626 BROXQ5VW32 411 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 ARID3BQ8IVW6 561 aaPredicted RBP8.65□□□□□ -1.03
HTT-208ENST00000510626 TRIM51Q9BSJ1 452 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 HOXC10Q9NYD6 342 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 PRR29P0C7W0 189 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 FMR1Q06787 632 aaKnown RBP eCLIP8.65□□□□□ -1.033e-6■■■■□ 23.9
HTT-208ENST00000510626 ENPEPQ07075 957 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 FRG1Q14331 258 aaKnown RBP8.65□□□□□ -1.03
HTT-208ENST00000510626 PDCD4Q53EL6 469 aaKnown RBP8.65□□□□□ -1.03
HTT-208ENST00000510626 CCDC157Q569K6 752 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 CYP4A22Q5TCH4 519 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 A1BGP04217 495 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 HOXC6P09630 235 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 TMC3Q7Z5M5 1100 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 ZFYVE19Q96K21 471 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 TMEM79Q9BSE2 394 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 CYP26A1O43174 497 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 IDH3BO43837 385 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 RARBP10826 455 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 MLNP12872 115 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 CDH3P22223 829 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 DNAJC10Q8IXB1 793 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 PTTG2Q9NZH5 202 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 POLG2Q9UHN1 485 aa8.65□□□□□ -1.03
HTT-208ENST00000510626 CDO1Q16878 200 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PMF1Q6P1K2 205 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ADHFE1Q8IWW8 467 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ADAM28Q9UKQ2 775 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms