RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ECT2Q9H8V3 914 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.06■□□□□ 0.648e-7■■■■■ 194.6
TPM3-220ENST00000509601 DUS2Q9NX74 493 aaKnown RBP19.06■□□□□ 0.64
TPM3-220ENST00000509601 EHD2Q9NZN4 543 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 HMGXB4Q9UGU5 601 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 PCDHA5Q9Y5H7 936 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 KINO60870 393 aaKnown RBP19.05■□□□□ 0.64
TPM3-220ENST00000509601 OLFM2O95897 454 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 HOXC13P31276 330 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 GJA4P35212 333 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 GALK1P51570 392 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 SLC7A9P82251 487 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 ORC1Q13415 861 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 EML3Q32P44 896 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 FAM35AQ86V20 835 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 C12orf29Q8N999 325 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 ZMIZ2Q8NF64 920 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 SCAMP5Q8TAC9 235 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 TIGD1Q96MW7 591 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 GSDMAQ96QA5 445 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 TWNKQ96RR1 684 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 CHORDC1Q9UHD1 332 aaPredicted RBP19.05■□□□□ 0.64
TPM3-220ENST00000509601 WNT6Q9Y6F9 365 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 ATG2BQ96BY7 2078 aa19.05■□□□□ 0.64
TPM3-220ENST00000509601 GOLGA6L4A6NEF3 574 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 BEST1O76090 585 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 OAS1P00973 400 aaKnown RBP19.04■□□□□ 0.64
TPM3-220ENST00000509601 KRT13P13646 458 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 YWHAQP27348 245 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 PIK3CAP42336 1068 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 COBLL1Q53SF7 1204 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 ZNF658Q5TYW1 1059 aaPredicted RBP19.04■□□□□ 0.64
TPM3-220ENST00000509601 NAIF1Q69YI7 327 aaPredicted RBP19.04■□□□□ 0.64
TPM3-220ENST00000509601 DCLK2Q8N568 766 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 WHAMMQ8TF30 809 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 CCDC34Q96HJ3 373 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 SMOQ99835 787 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 MED10Q9BTT4 135 aa19.04■□□□□ 0.64
TPM3-220ENST00000509601 FAM92AA1XBS5 289 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 K7ESF4 209 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 LEFTY2O00292 366 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 CLSTN1O94985 981 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 RTN3O95197 1032 aaPredicted RBP19.03■□□□□ 0.64
TPM3-220ENST00000509601 PAPSS2O95340 614 aaPredicted RBP19.03■□□□□ 0.64
TPM3-220ENST00000509601 ABL1P00519 1130 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 CCDC130P13994 396 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 GTF2H1P32780 548 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 PDE6CP51160 858 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 PMS1P54277 932 aaKnown RBP19.03■□□□□ 0.64
TPM3-220ENST00000509601 DMWDQ09019 674 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 INCA1Q0VD86 236 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 IFRD2Q12894 506 aaPredicted RBP19.03■□□□□ 0.64
TPM3-220ENST00000509601 ANKRD40Q6AI12 368 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 TTC16Q8NEE8 873 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 SLC2A14Q8TDB8 520 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 SEMA4DQ92854 862 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 MMRN2Q9H8L6 949 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 CYP3A43Q9HB55 503 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 TMEM8AQ9HCN3 771 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 CSNK1G1Q9HCP0 422 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 RMND1Q9NWS8 449 aa19.03■□□□□ 0.64
TPM3-220ENST00000509601 CETN3O15182 167 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 AP1G2O75843 785 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 ZDHHC11BP0C7U3 371 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 IFNAR2P48551 515 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 NRLP54845 237 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 AMPD2Q01433 879 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 SNX30Q5VWJ9 437 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 KRT39Q6A163 491 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 PKN3Q6P5Z2 889 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 ZC3H3Q8IXZ2 948 aaKnown RBP19.02■□□□□ 0.64
TPM3-220ENST00000509601 ELOA2Q8IYF1 753 aaPredicted RBP19.02■□□□□ 0.64
TPM3-220ENST00000509601 OVCA2Q8WZ82 227 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 EZH1Q92800 747 aaPredicted RBP19.02■□□□□ 0.64
TPM3-220ENST00000509601 SMARCD1Q96GM5 515 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 SLITRK1Q96PX8 696 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 HNRNPABQ99729 332 aaKnown RBP19.02■□□□□ 0.64
TPM3-220ENST00000509601 EPC1Q9H2F5 836 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 DMAP1Q9NPF5 467 aaPredicted RBP19.02■□□□□ 0.64
TPM3-220ENST00000509601 COMMD8Q9NX08 183 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 CPQQ9Y646 472 aa19.02■□□□□ 0.64
TPM3-220ENST00000509601 ATP8B3O60423 1300 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 DCHS1Q96JQ0 3298 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 CILPO75339 1184 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 SMC2O95347 1197 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 EGFP01133 1207 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 PGFP49763 221 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 SLC5A3P53794 718 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 GRSF1Q12849 480 aaKnown RBP eCLIP19.01■□□□□ 0.63
TPM3-220ENST00000509601 ADGRG2Q8IZP9 1017 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 KIAA1958Q8N8K9 716 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 RUBCNQ92622 972 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 SMARCE1Q969G3 411 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 FBXO32Q969P5 355 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 P2RY13Q9BPV8 354 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 KRT82Q9NSB4 513 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 FAM49BQ9NUQ9 324 aa19.01■□□□□ 0.63
TPM3-220ENST00000509601 CHURC1-FNTBB4DL54 471 aa19■□□□□ 0.63
TPM3-220ENST00000509601 HRO43593 1189 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms