RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 UXTQ9UBK9 157 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 RALGAPA1Q6GYQ0 2036 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 SPTBN2O15020 2390 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 GREB1Q4ZG55 1949 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 ANAPC1Q9H1A4 1944 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 ZNF233A6NK53 670 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 KCNJ18B7U540 433 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 RETP07949 1114 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 ARSAP15289 507 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 SDHBP21912 280 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 PCSK1P29120 753 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 HOXA6P31267 233 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 CNR2P34972 360 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
HMGCL-208ENST00000509389 MYO1EQ12965 1108 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-208ENST00000509389 CFAP221Q4G0U5 840 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 FSTL4Q6MZW2 842 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 DPH6Q7L8W6 267 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 LIMS2Q7Z4I7 341 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 CBWD2Q8IUF1 395 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 SPATA2LQ8IUW3 424 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-208ENST00000509389 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 HPDLQ96IR7 371 aa15.57■□□□□ 0.08
HMGCL-208ENST00000509389 CNOT6LQ96LI5 555 aaKnown RBP15.57■□□□□ 0.08
HMGCL-208ENST00000509389 R3HCC1Q9Y3T6 440 aaKnown RBP15.57■□□□□ 0.08
HMGCL-208ENST00000509389 CBFA2T2O43439 604 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 ATP2C2O75185 946 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 FGFR1OPO95684 399 aaKnown RBP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 TNNC2P02585 160 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 NR1I3Q14994 352 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 SURF1Q15526 300 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 TPD52L1Q16890 204 aaPredicted RBP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 DUOXA2Q1HG44 320 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 TMEM196Q5HYL7 178 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 CC2D1AQ6P1N0 951 aaPredicted RBP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 PKN3Q6P5Z2 889 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 FILIP1Q7Z7B0 1213 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 SCN4BQ8IWT1 228 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 KBTBD7Q8WVZ9 684 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 FUBP3Q96I24 572 aaKnown RBP eCLIP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 NAP1L5Q96NT1 182 aaPredicted RBP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 CYP2S1Q96SQ9 504 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
HMGCL-208ENST00000509389 AGPAT3Q9NRZ7 376 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 HSPBP1Q9NZL4 362 aa15.56■□□□□ 0.08
HMGCL-208ENST00000509389 PTPRDP23468 1912 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 TRDMT1O14717 391 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 SLC16A3O15427 465 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 CALUO43852 315 aaPredicted RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 GNA14O95837 355 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 LMO2P25791 158 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 MAGEA11P43364 429 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 COPB1P53618 953 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 UBASH3AP57075 661 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 GRSF1Q12849 480 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 PDGFRLQ15198 375 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 MIIPQ5JXC2 388 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 WDR5BQ86VZ2 330 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 SLC22A12Q96S37 553 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 SYT15Q9BQS2 421 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 KIAA1586Q9HCI6 787 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 FBRSL1Q9HCM7 1045 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 TRPC7Q9HCX4 862 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 CDV3Q9UKY7 258 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 CDH9Q9ULB4 789 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.55■□□□□ 0.08
HMGCL-208ENST00000509389 SDK1Q7Z5N4 2213 aa15.55■□□□□ 0.08
HMGCL-208ENST00000509389 SPAG17Q6Q759 2223 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 TRAV19A0A0A6YYK7 116 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 LGALS16A8MUM7 142 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 LRP3O75074 770 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 SERPINC1P01008 464 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 NR3C1P04150 777 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 USP17L7P0C7H9 530 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 WARSP23381 471 aaKnown RBP15.54■□□□□ 0.08
HMGCL-208ENST00000509389 NR2F2P24468 414 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 PSMC1P62191 440 aaKnown RBP15.54■□□□□ 0.08
HMGCL-208ENST00000509389 MTF1Q14872 753 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 ZNF77Q15935 545 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 HSP90AA4PQ58FG1 418 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 C4orf50Q6ZRC1 276 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 HS2ST1Q7LGA3 356 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 WDR49Q8IV35 697 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 VSTM4Q8IW00 320 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 TRIM59Q8IWR1 403 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 MYLPFQ96A32 169 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 CRTAC1Q9NQ79 661 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
HMGCL-208ENST00000509389 MAGEC2Q9UBF1 373 aaPredicted RBP15.54■□□□□ 0.08
HMGCL-208ENST00000509389 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 HELZP42694 1942 aaKnown RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 EGFP01133 1207 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 CKMP06732 381 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 PDGFRBP09619 1106 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 GALK1P51570 392 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 AMPD2Q01433 879 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 USP4Q13107 963 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms