RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 ABCA7Q8IZY2 2146 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 F8VP50 259 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 SCAMP3O14828 347 aaKnown RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 RNF40O75150 1001 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 EPN2O95208 641 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 PTPN1P18031 435 aaKnown RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 DRD1P21728 446 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 KCNA4P22459 653 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 GNL1P36915 607 aaPredicted RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 PXNP49023 591 aaPredicted RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 PGFP49763 221 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 USP4Q13107 963 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 MAPRE1Q15691 268 aaKnown RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 FBXO43Q4G163 708 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 KRBA2Q6ZNG9 492 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 CPA6Q8N4T0 437 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 TMEM174Q8WUU8 243 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
RNF4-212ENST00000509258 PCDHGA5Q9Y5G8 931 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
RNF4-212ENST00000509258 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 USP24Q9UPU5 2620 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 TRAV19A0A0A6YYK7 116 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 PDXKO00764 312 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 AXIN1O15169 862 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZNF202O95125 648 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 EGFP01133 1207 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 CKMP06732 381 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 USP17L7P0C7H9 530 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZNF806P0C7X5 589 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 GRIK1P39086 918 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 IFNAR2P48551 515 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 TNNC1P63316 161 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 NR1H3Q13133 447 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 PSMD2Q13200 908 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 BIRC3Q13489 604 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 NCOA4Q13772 614 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 MTF1Q14872 753 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 SF3A2Q15428 464 aaKnown RBP11.61□□□□□ -0.55
RNF4-212ENST00000509258 ST3GAL2Q16842 350 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 GAB4Q2WGN9 574 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZACNQ401N2 412 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 KBTBD6Q86V97 674 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 B3GALNT2Q8NCR0 500 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ERCC4Q92889 916 aaPredicted RBP11.61□□□□□ -0.55
RNF4-212ENST00000509258 ATP2A3Q93084 1043 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ACDQ96AP0 544 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 CEP295NLQ96MC4 621 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 TWNKQ96RR1 684 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 P2RY13Q9BPV8 354 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 TTLL2Q9BWV7 592 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 RNF38Q9H0F5 515 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 SNX25Q9H3E2 840 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 APOBEC3GQ9HC16 384 aaKnown RBP11.61□□□□□ -0.55
RNF4-212ENST00000509258 USP25Q9UHP3 1055 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
RNF4-212ENST00000509258 NUP205Q92621 2012 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 A8MXQ7 604 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 PHACTR2O75167 634 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 KRT37O76014 449 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 BEST1O76090 585 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 HLA-DRAP01903 254 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 CCDC130P13994 396 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 PFKLP17858 780 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 ANXA13P27216 316 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 GJA4P35212 333 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 MPLP40238 635 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 ASPAP45381 313 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 TRPC3Q13507 836 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 PNOCQ13519 176 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 KCNB1Q14721 858 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 ELF2Q15723 593 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 CCDC6Q16204 474 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 PLA2G2CQ5R387 149 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 SYT13Q7L8C5 426 aa11.6□□□□□ -0.55
RNF4-212ENST00000509258 ACOT1Q86TX2 421 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms