RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LRG1P02750 347 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 F11P03951 625 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 PNMA6AP0CW24 399 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 MYL4P12829 197 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 LAMP2P13473 410 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 KRT13P13646 458 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 CD58P19256 250 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 BDNFP23560 247 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 RPL13P26373 211 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 VIPR2P41587 438 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 MAGEA11P43364 429 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF132P52740 706 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 RAD23BP54727 409 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TNNC1P63316 161 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ZXDBP98169 803 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 LRMPQ12912 555 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 MYO1EQ12965 1108 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TRPC3Q13507 836 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 UVSSAQ2YD98 709 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM78AQ5JUQ0 283 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TCERG1LQ5VWI1 586 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 CYP26C1Q6V0L0 522 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 BHLHA9Q7RTU4 235 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 DNAJB7Q7Z6W7 309 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ACOT1Q86TX2 421 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TTC30AQ86WT1 665 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 METTL23Q86XA0 190 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 SIX5Q8N196 739 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC4A11Q8NBS3 891 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 FBXL13Q8NEE6 735 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 OR6B3Q8NGW1 331 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TTLL2Q9BWV7 592 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 GPR88Q9GZN0 384 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 INTS2Q9H0H0 1204 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 KCNK12Q9HB15 430 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ABCB6Q9NP58 842 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ACP6Q9NPH0 428 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 KRT82Q9NSB4 513 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 RAB20Q9NX57 234 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 HSFX1Q9UBD0 423 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 HOOK1Q9UJC3 728 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 PCDHB5Q9Y5E4 795 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 MYO10Q9HD67 2058 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 BECN2A8MW95 431 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 A8MXQ7 604 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 EPHB6O15197 1021 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 PMM2O15305 246 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 PHACTR2O75167 634 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 XYLBO75191 536 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF18P17022 549 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 NPR3P17342 541 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 PTPN1P18031 435 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 GABRR2P28476 465 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 PCSK1P29120 753 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 GBP2P32456 591 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 LHX1P48742 406 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 KLK7P49862 253 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 ZXDAP98168 799 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 TSPY1Q01534 308 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CYP27A1Q02318 531 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 TYRO3Q06418 890 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CUL2Q13617 745 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 SGSM1Q2NKQ1 1148 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 EML3Q32P44 896 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC40Q4G0X9 1142 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC183Q5T5S1 534 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 TANGO2Q6ICL3 276 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CAVIN1Q6NZI2 390 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 VITQ6UXI7 678 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CLEC20AQ6ZU45 233 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 MLKLQ8NB16 471 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 OLIG1Q8TAK6 271 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC2A14Q8TDB8 520 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 C2orf15Q8WU43 125 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 TFAP2BQ92481 460 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 TAF4BQ92750 862 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 WBP2Q969T9 261 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 MCRS1Q96EZ8 462 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 P2RY11Q96G91 374 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC34Q96HJ3 373 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 FUBP3Q96I24 572 aaKnown RBP eCLIP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 ASB16Q96NS5 453 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 KCNK16Q96T55 309 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 OXCT2Q9BYC2 517 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 PIDD1Q9HB75 910 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CISHQ9NSE2 258 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 GCNT4Q9P109 453 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 DUSP12Q9UNI6 340 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM50BQ9Y247 325 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 CCL26Q9Y258 94 aa7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 MRPS23Q9Y3D9 190 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-207ENST00000509162 BICDL2A1A5D9 508 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 C2orf78A6NCI8 922 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 J3QL48 77 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 OLFM2O95897 454 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 AFPP02771 609 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 ATP1A3P13637 1013 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms