RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 UBALD2Q8IYN6 164 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SHKBP1Q8TBC3 707 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 ING5Q8WYH8 240 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SMARCD2Q92925 531 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 KAT5Q92993 513 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 MYADMQ96S97 322 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 KCNK16Q96T55 309 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 TRIM62Q9BVG3 475 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 NUP58Q9BVL2 599 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 LRRC3Q9BY71 257 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 KIF9Q9HAQ2 790 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 LRRC4Q9HBW1 653 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 ZFP14Q9HCL3 533 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SIX2Q9NPC8 291 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 TLR8Q9NR97 1041 aaKnown RBP9.65□□□□□ -0.86
NUP54-207ENST00000508583 OBP2AQ9NY56 170 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 MYO6Q9UM54 1294 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SORCS3Q9UPU3 1222 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 DOCK6Q96HP0 2047 aa9.65□□□□□ -0.87
NUP54-207ENST00000508583 GREB1Q4ZG55 1949 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 FAM92AA1XBS5 289 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 F8VZ95 297 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 M0QYV0 167 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 SART1O43290 800 aaKnown RBP9.64□□□□□ -0.87
NUP54-207ENST00000508583 ECI2O75521 394 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 F11P03951 625 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 KRT9P35527 623 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 CCR2P41597 374 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 STAT1P42224 750 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ACADSBP45954 432 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 POLR2FP61218 127 aaKnown RBP9.64□□□□□ -0.87
NUP54-207ENST00000508583 FANCCQ00597 558 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 GOLGA8FQ08AF8 430 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 GOLGA8DPQ0D2H9 430 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 TDGQ13569 410 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 GJB7Q6PEY0 223 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 APTXQ7Z2E3 356 aaKnown RBP9.64□□□□□ -0.87
NUP54-207ENST00000508583 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP54-207ENST00000508583 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 FAM71AQ8IYT1 594 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 SIX6OS1Q8N1H7 587 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 KIAA1958Q8N8K9 716 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ZSCAN18Q8TBC5 510 aaPredicted RBP9.64□□□□□ -0.87
NUP54-207ENST00000508583 DEPDC1BQ8WUY9 529 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 KCTD13Q8WZ19 329 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 GOLGA1Q92805 767 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ELSPBP1Q96BH3 223 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 TCEAL4Q96EI5 215 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 MCRS1Q96EZ8 462 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ASB16Q96NS5 453 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 SMOQ99835 787 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 NACA2Q9H009 215 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 MIS12Q9H081 205 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 TRPV4Q9HBA0 871 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 IL21Q9HBE4 155 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 ZNF334Q9HCZ1 680 aaPredicted RBP9.64□□□□□ -0.87
NUP54-207ENST00000508583 CYLDQ9NQC7 956 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 CNGB3Q9NQW8 809 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 IL37Q9NZH6 218 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 SCML2Q9UQR0 700 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 SIK3Q9Y2K2 1263 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 FHOD1Q9Y613 1164 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 NOTCH4Q99466 2003 aa9.64□□□□□ -0.87
NUP54-207ENST00000508583 PATJQ8NI35 1801 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 TTC28Q96AY4 2481 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 MUC3AQ02505 3323 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 ZNF638Q14966 1978 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 BDP1A6H8Y1 2624 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 ANHXE9PGG2 379 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 FOXN3O00409 490 aaPredicted RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 CYP26A1O43174 497 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 DCXO43602 365 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 BEST1O76090 585 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 FBXO21O94952 628 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CKMP06732 381 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 TPM1P09493 284 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 RALAP11233 206 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 SOX5P35711 763 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 KIF11P52732 1056 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CACNA2D1P54289 1103 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 PFKPQ01813 784 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 PDE4CQ08493 712 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 IFRD2Q12894 506 aaPredicted RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 TAF10Q12962 218 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 HTR4Q13639 388 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms