RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 SPEM1Q8N4L4 309 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 ZMIZ2Q8NF64 920 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 SMARCE1Q969G3 411 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 RNF38Q9H0F5 515 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
CLDND1-218ENST00000508503 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 DCHS1Q96JQ0 3298 aa12.89□□□□□ -0.35
CLDND1-218ENST00000508503 LMNAP02545 664 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 CKMP06732 381 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 YWHAQP27348 245 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 PIK3CAP42336 1068 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 PMS1P54277 932 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 CSTF1Q05048 431 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 LRRC32Q14392 662 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 MTF1Q14872 753 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 EML3Q32P44 896 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 ZC3H14Q6PJT7 736 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 SCARA5Q6ZMJ2 495 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 TTC8Q8TAM2 541 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 HNRNPABQ99729 332 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 SMOQ99835 787 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 EBF3Q9H4W6 596 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 FAM124BQ9H5Z6 455 aaPredicted RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 ZSCAN32Q9NX65 697 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 HMGXB4Q9UGU5 601 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
CLDND1-218ENST00000508503 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
CLDND1-218ENST00000508503 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 STX10O60499 249 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 GADD45BO75293 160 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 CILPO75339 1184 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 ARSAP15289 507 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 BMP6P22004 513 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 HOXA6P31267 233 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 GJA4P35212 333 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 CXCL12P48061 93 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 CCR3P51677 355 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 AMPD2Q01433 879 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 PON2Q15165 354 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 ADGRG2Q8IZP9 1017 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 SCAMP5Q8TAC9 235 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 SLITRK1Q96PX8 696 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 TWNKQ96RR1 684 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 IMPG2Q9BZV3 1241 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 LINC00597Q9H2U6 94 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 DMAP1Q9NPF5 467 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
CLDND1-218ENST00000508503 HELZP42694 1942 aaKnown RBP12.87□□□□□ -0.35
CLDND1-218ENST00000508503 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 LEFTY2O00292 366 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 PMM2O15305 246 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 AP1G2O75843 785 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 BEST1O76090 585 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
CLDND1-218ENST00000508503 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
CLDND1-218ENST00000508503 PPP1R2P41236 205 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 GALK1P51570 392 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 NRLP54845 237 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 TSSK4Q6SA08 328 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 TTC39CQ8N584 583 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 SLC2A14Q8TDB8 520 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 ATP2A3Q93084 1043 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 MED10Q9BTT4 135 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 PNPLA8Q9NP80 782 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 DUS2Q9NX74 493 aaKnown RBP12.86□□□□□ -0.35
CLDND1-218ENST00000508503 CHORDC1Q9UHD1 332 aaPredicted RBP12.86□□□□□ -0.35
CLDND1-218ENST00000508503 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
CLDND1-218ENST00000508503 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
CLDND1-218ENST00000508503 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms