RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
LMNA-222ENST00000508500 GAB4Q2WGN9 574 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
LMNA-222ENST00000508500 TTC16Q8NEE8 873 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 PARD6AQ9NPB6 346 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 TRPM5Q9NZQ8 1165 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 HMGXB4Q9UGU5 601 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 ANTXRLA6NF34 631 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
LMNA-222ENST00000508500 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
LMNA-222ENST00000508500 PPP3CAQ08209 521 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 ORC1Q13415 861 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 KCNB1Q14721 858 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 PPP2R5DQ14738 602 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 LPAL2Q16609 132 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 NFIL3Q16649 462 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 HEATR6Q6AI08 1181 aaKnown RBP17.24■□□□□ 0.35
LMNA-222ENST00000508500 ACOT1Q86TX2 421 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 FAM35AQ86V20 835 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 FUKQ8N0W3 1084 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 ZMIZ2Q8NF64 920 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
LMNA-222ENST00000508500 NCDNQ9UBB6 729 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 SPTBN2O15020 2390 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 ABCA7Q8IZY2 2146 aa17.24■□□□□ 0.35
LMNA-222ENST00000508500 LEFTY2O00292 366 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 IKBKBO14920 756 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 MAPK13O15264 365 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 BEST1O76090 585 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 HLA-DRAP01903 254 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 PFKLP17858 780 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 HOXA6P31267 233 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 ASPAP45381 313 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 IFNAR2P48551 515 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 VAMP7P51809 220 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 NDST1P52848 882 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 MCCD1P59942 119 aaPredicted RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 SLC7A9P82251 487 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 IFRD2Q12894 506 aaPredicted RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 SGSM1Q2NKQ1 1148 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 ZCWPW2Q504Y3 356 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 LONP2Q86WA8 852 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 NUP93Q8N1F7 819 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 GUF1Q8N442 669 aaKnown RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 GPR161Q8N6U8 529 aaKnown RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 SCAMP5Q8TAC9 235 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 APOBEC3GQ9HC16 384 aaKnown RBP17.23■□□□□ 0.35
LMNA-222ENST00000508500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.354e-7■■■■■ 41.7
LMNA-222ENST00000508500 IL37Q9NZH6 218 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 NUP205Q92621 2012 aa17.23■□□□□ 0.35
LMNA-222ENST00000508500 RNF40O75150 1001 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 TRIM49P0CI25 452 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 TRIM49CP0CI26 452 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 CCDC130P13994 396 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 NR2F2P24468 414 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 PPP3CCP48454 512 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 PGFP49763 221 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
LMNA-222ENST00000508500 SMYD4Q8IYR2 804 aaPredicted RBP17.22■□□□□ 0.35
LMNA-222ENST00000508500 CRYBG2Q8N1P7 616 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 CPA6Q8N4T0 437 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 C12orf29Q8N999 325 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 SMOQ99835 787 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 CHORDC1Q9UHD1 332 aaPredicted RBP17.22■□□□□ 0.35
LMNA-222ENST00000508500 CPQQ9Y646 472 aa17.22■□□□□ 0.35
LMNA-222ENST00000508500 EPG5Q9HCE0 2579 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 FAM92AA1XBS5 289 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
LMNA-222ENST00000508500 ABL1P00519 1130 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 DRD1P21728 446 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 YWHAQP27348 245 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 OPRD1P41143 372 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 GCLMP48507 274 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 PXNP49023 591 aaPredicted RBP17.21■□□□□ 0.35
LMNA-222ENST00000508500 ATXN1P54253 815 aaKnown RBP17.21■□□□□ 0.35
LMNA-222ENST00000508500 WDR5BQ86VZ2 330 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 ADGRG2Q8IZP9 1017 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 TAF4BQ92750 862 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 CD101Q93033 1021 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.35
LMNA-222ENST00000508500 MED10Q9BTT4 135 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 EHD2Q9NZN4 543 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
LMNA-222ENST00000508500 TPRP12270 2363 aaKnown RBP17.2■□□□□ 0.34
LMNA-222ENST00000508500 AP1G2O75843 785 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 RTN3O95197 1032 aaPredicted RBP17.2■□□□□ 0.34
LMNA-222ENST00000508500 ZDHHC11BP0C7U3 371 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 SLC5A3P53794 718 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms