RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 LCTP09848 1927 aa5.17□□□□□ -1.58
NUP54-206ENST00000508465 EYSQ5T1H1 3165 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 LOC102724159A0A0B4J2E5 919 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 KPNA6O60684 536 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 ATP9AO75110 1047 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 CABYRO75952 493 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 GGPS1O95749 300 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 CD4P01730 458 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 ZNF286BP0CG31 522 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 CSF2RAP15509 400 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 CDK11BP21127 795 aaKnown RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 BMP5P22003 454 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 GHRHRQ02643 423 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 PWP2Q15269 919 aaKnown RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 HSDL1Q3SXM5 330 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 BRDTQ58F21 947 aaPredicted RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 UTP14CQ5TAP6 766 aaKnown RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 JAKMIP3Q5VZ66 844 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 PCSK4Q6UW60 755 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 Q7L0L9 218 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 SCUBE1Q8IWY4 988 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 TDHQ8IZJ6 230 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 NECAB1Q8N987 351 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 KAT2BQ92831 832 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 VOPP1Q96AW1 172 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 SCLYQ96I15 445 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.16□□□□□ -1.583e-9■□□□□ 10
NUP54-206ENST00000508465 ALDH8A1Q9H2A2 487 aaPredicted RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 MLXIPQ9HAP2 919 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 RIC8AQ9NPQ8 531 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 ST7Q9NRC1 585 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 RBM28Q9NW13 759 aaKnown RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 BARHL2Q9NY43 387 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 MAP3K20Q9NYL2 800 aaKnown RBP5.16□□□□□ -1.58
NUP54-206ENST00000508465 TBX21Q9UL17 535 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 CHD9Q3L8U1 2897 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 FRMPD3Q5JV73 1810 aa5.16□□□□□ -1.58
NUP54-206ENST00000508465 MYH6P13533 1939 aa5.15□□□□□ -1.58
NUP54-206ENST00000508465 TRAV20A0A0B4J274 112 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 CCDC196A0A1B0GTZ2 297 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 BLACEA4D250 179 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 PRAMEF25A6NGN4 478 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 GRXCR1A8MXD5 290 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 AQP7O14520 342 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 GSTA4O15217 222 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 PRPF3O43395 683 aaKnown RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 PPFIA4O75335 1185 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 MMP3P08254 477 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 ARP10275 920 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 SCG2P13521 617 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 UBA1P22314 1058 aaKnown RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 AOAHP28039 575 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 ADCY7P51828 1080 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 CD83Q01151 205 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 AKAP17AQ02040 695 aaKnown RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 FPGSQ05932 587 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 SSRP1Q08945 709 aaKnown RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 PTGISQ16647 500 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 DGKDQ16760 1214 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 PFKFB3Q16875 520 aaPredicted RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 FIGNQ5HY92 759 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 FAM109BQ6ICB4 259 aaPredicted RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 MFSD5Q6N075 450 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 ZNF365Q70YC5 407 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 DEFB128Q7Z7B8 93 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 GSPT2Q8IYD1 628 aaKnown RBP5.15□□□□□ -1.59
NUP54-206ENST00000508465 SAMD3Q8N6K7 520 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 PPTC7Q8NI37 304 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 FBXW5Q969U6 566 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 AIFM3Q96NN9 605 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 AGXT2Q9BYV1 514 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 TM6SF1Q9BZW5 370 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 MAF1Q9H063 256 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 HIPK3Q9H422 1215 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 GJB4Q9NTQ9 266 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 VPS54Q9P1Q0 977 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 HDAC6Q9UBN7 1215 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 TPCN1Q9ULQ1 816 aa5.15□□□□□ -1.59
NUP54-206ENST00000508465 REV3LO60673 3130 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 GSTTP1A0A1W2PQM5 241 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 RHOBTB3O94955 611 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 FGBP02675 491 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 TGFB3P10600 412 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 IFNAR1P17181 557 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 KRT4P19013 534 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 PTGS2P35354 604 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 NEK4P51957 841 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 AK2P54819 239 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 EVCP57679 992 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 NLRP5P59047 1200 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 HGFACQ04756 655 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 KIAA0753Q2KHM9 967 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 TMEM200BQ69YZ2 307 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 GRAMD4Q6IC98 578 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 KCNV1Q6PIU1 500 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 MTDHQ86UE4 582 aaKnown RBP5.14□□□□□ -1.59
NUP54-206ENST00000508465 OSTM1Q86WC4 334 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 FBXL16Q8N461 479 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 TMEM199Q8N511 208 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms