RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 SYT13Q7L8C5 426 aa17.43■□□□□ 0.38
DDR1-263ENST00000508317 CCDC150Q8NCX0 1101 aa17.43■□□□□ 0.38
DDR1-263ENST00000508317 PARD6AQ9NPB6 346 aa17.43■□□□□ 0.38
DDR1-263ENST00000508317 CRTAC1Q9NQ79 661 aa17.43■□□□□ 0.38
DDR1-263ENST00000508317 MAP1BP46821 2468 aaKnown RBP17.43■□□□□ 0.38
DDR1-263ENST00000508317 A0A1B0GVL5 298 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 C2orf78A6NCI8 922 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
DDR1-263ENST00000508317 LEFTY2O00292 366 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 SLC30A4O14863 429 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 STAU1O95793 577 aaKnown RBP17.42■□□□□ 0.38
DDR1-263ENST00000508317 MBL2P11226 248 aaPredicted RBP17.42■□□□□ 0.38
DDR1-263ENST00000508317 PXNP49023 591 aaPredicted RBP17.42■□□□□ 0.38
DDR1-263ENST00000508317 DGKEP52429 567 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 GOLGA8FQ08AF8 430 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 GOLGA8DPQ0D2H9 430 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 DMC1Q14565 340 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 EML3Q32P44 896 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 C12orf56Q8IXR9 622 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 NUP93Q8N1F7 819 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 GLIS3Q8NEA6 775 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 FBXO32Q969P5 355 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 FAM84AQ96KN4 292 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 HHIPQ96QV1 700 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 MRPL45Q9BRJ2 306 aaKnown RBP17.42■□□□□ 0.38
DDR1-263ENST00000508317 ARRDC1-AS1Q9H2J1 176 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 GCNT4Q9P109 453 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 SH3BP1Q9Y3L3 701 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 PTPRJQ12913 1337 aa17.42■□□□□ 0.38
DDR1-263ENST00000508317 TICRRQ7Z2Z1 1910 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 FAM237AA0A1B0GTK4 181 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 ZNF840PA6NDX5 716 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 TGFB1I1O43294 461 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 HCRTO43612 131 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 TADA3O75528 432 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 CST3P01034 146 aaPredicted RBP17.41■□□□□ 0.38
DDR1-263ENST00000508317 RPN1P04843 607 aaKnown RBP17.41■□□□□ 0.38
DDR1-263ENST00000508317 MYL1P05976 194 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 SLFN14P0C7P3 912 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 PFKFB1P16118 471 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 MYL6P60660 151 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 TAF10Q12962 218 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 ST3GAL2Q16842 350 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 BMT2Q1RMZ1 405 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 LIMS2Q7Z4I7 341 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 TTC30AQ86WT1 665 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 OVCA2Q8WZ82 227 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 CHFRQ96EP1 664 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 TTLL2Q9BWV7 592 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 DMAP1Q9NPF5 467 aaPredicted RBP17.41■□□□□ 0.38
DDR1-263ENST00000508317 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 CPQQ9Y646 472 aa17.41■□□□□ 0.38
DDR1-263ENST00000508317 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 ASPMQ8IZT6 3477 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 OTOL1A6NHN0 477 aaPredicted RBP17.4■□□□□ 0.38
DDR1-263ENST00000508317 GOLGA6L22H0YM25 854 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
DDR1-263ENST00000508317 APODP05090 189 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 SLC7A9P82251 487 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 NCOA4Q13772 614 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 BYSLQ13895 437 aaKnown RBP17.4■□□□□ 0.38
DDR1-263ENST00000508317 SGSM1Q2NKQ1 1148 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 PPM1JQ5JR12 505 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 HECTD3Q5T447 861 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 TAF4BQ92750 862 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 SLC22A12Q96S37 553 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 SMPD4Q9NXE4 827 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 CFAP97Q9P2B7 532 aa17.4■□□□□ 0.38
DDR1-263ENST00000508317 MAP3K13O43283 966 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 EPN2O95208 641 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 ZNF806P0C7X5 589 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 KRT13P13646 458 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 TGM1P22735 817 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 HOXD13P35453 343 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 SYKP43405 635 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 NDUFA8P51970 172 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 SEC13P55735 322 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 UBE2HP62256 183 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 MRPS21P82921 87 aaKnown RBP17.39■□□□□ 0.37
DDR1-263ENST00000508317 CUL4BQ13620 913 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 HSF5Q4G112 596 aaPredicted RBP17.39■□□□□ 0.37
DDR1-263ENST00000508317 C2orf27AQ580R0 203 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 OTUB2Q96DC9 234 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 SPACA7Q96KW9 195 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 PNKPQ96T60 521 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 LINC00597Q9H2U6 94 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 FBXO44Q9H4M3 255 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 POLMQ9NP87 494 aaPredicted RBP17.39■□□□□ 0.37
DDR1-263ENST00000508317 BCCIPQ9P287 314 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDR1-263ENST00000508317 EBF1Q9UH73 591 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 CHD8Q9HCK8 2581 aa17.39■□□□□ 0.37
DDR1-263ENST00000508317 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
DDR1-263ENST00000508317 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms