RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 PRMT7Q9NVM4 692 aaPredicted RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 ERAP1Q9NZ08 941 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 SENP1Q9P0U3 644 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 AKT3Q9Y243 479 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CHKBQ9Y259 395 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 E7ESA3 106 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 EDF1O60869 148 aaKnown RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 PDGFRAP16234 1089 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 RGS7P49802 495 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 SLC26A2P50443 739 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ZNF143P52747 638 aaPredicted RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 GSCP56915 257 aaPredicted RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 ATP11AP98196 1134 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 OR6B2Q6IFH4 312 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 C1orf228Q6PIY5 440 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 MAGEC3Q8TD91 643 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 MZB1Q8WU39 189 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 DCAKDQ8WVC6 231 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ASNSD1Q9NWL6 643 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 MCF2LO15068 1137 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 HMGCRP04035 888 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 VDRP11473 427 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 PHBP35232 272 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ELK3P41970 407 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 PHKA2P46019 1235 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 GCLCP48506 637 aaPredicted RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 RIPK1Q13546 671 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 TTLL4Q14679 1199 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 RASA2Q15283 850 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 FAM183BPQ6ZVS7 135 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 OTOAQ7RTW8 1153 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ERO1BQ86YB8 467 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 TCP10LQ8TDR4 215 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 AGAP11Q8TF27 550 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ERP27Q96DN0 273 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 DHRS4Q9BTZ2 278 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 FRMD8P1Q9BZ68 369 aaPredicted RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 ALG13Q9NP73 1137 aaKnown RBP11.42□□□□□ -0.58
LIN54-207ENST00000508171 GPATCH2LQ9NWQ4 482 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 SLC17A7Q9P2U7 560 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 TSPAN16Q9UKR8 245 aa11.42□□□□□ -0.58
LIN54-207ENST00000508171 C2CD4BA6NLJ0 364 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ENDOD1O94919 500 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 UNC5CO95185 931 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 PFKMP08237 780 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 MCF2P10911 925 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 GPD1P21695 349 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 MSH2P43246 934 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
LIN54-207ENST00000508171 ARHGAP1Q07960 439 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 SCYL2Q6P3W7 929 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 RGS9BPQ6ZS82 235 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 AGGF1Q8N302 714 aaeCLIP11.41□□□□□ -0.58
LIN54-207ENST00000508171 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 TMEM237Q96Q45 408 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ETNK1Q9HBU6 452 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 BARX2Q9UMQ3 279 aaPredicted RBP11.41□□□□□ -0.58
LIN54-207ENST00000508171 NDC80O14777 642 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 LGALS2P05162 132 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ZNF286BP0CG31 522 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 CCNB1P14635 433 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 IL4RP24394 825 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 SLC8A1P32418 973 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
LIN54-207ENST00000508171 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ZC3H12AQ5D1E8 599 aaKnown RBP11.41□□□□□ -0.58
LIN54-207ENST00000508171 LRRC37BQ96QE4 947 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 CNPY3Q9BT09 278 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 ASB7Q9H672 318 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 RNF19AQ9NV58 838 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 DPP3Q9NY33 737 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 HEY1Q9Y5J3 304 aa11.41□□□□□ -0.58
LIN54-207ENST00000508171 H7C0C1 242 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 TARSP26639 723 aaKnown RBP11.4□□□□□ -0.58
LIN54-207ENST00000508171 ATICP31939 592 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 PCK1P35558 622 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 ATP5OP48047 213 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 ROR1Q01973 937 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 RNASELQ05823 741 aaKnown RBP11.4□□□□□ -0.58
LIN54-207ENST00000508171 TTLL12Q14166 644 aaPredicted RBP11.4□□□□□ -0.58
LIN54-207ENST00000508171 ACAP1Q15027 740 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 NOMO1Q15155 1222 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 FAM187BQ17R55 369 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 CCDC14Q49A88 953 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 PMF1Q6P1K2 205 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 VSIG1Q86XK7 387 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
LIN54-207ENST00000508171 UTP4Q969X6 686 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms