RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SLC5A9Q2M3M2 681 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.1□□□□□ -1.75
LSM6-205ENST00000507449 ICE2Q659A1 982 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 SFRP4Q6FHJ7 346 aaPredicted RBP4.1□□□□□ -1.75
LSM6-205ENST00000507449 USP17L6PQ6QN14 398 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ARHGEF19Q8IW93 802 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 COLGALT2Q8IYK4 626 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 LNX2Q8N448 690 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ATG16L2Q8NAA4 619 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 OR1N1Q8NGS0 311 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 MYCBPAPQ8TBZ2 947 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 FAM71BQ8TC56 605 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ZBTB45Q96K62 511 aaPredicted RBP4.1□□□□□ -1.75
LSM6-205ENST00000507449 SORCS2Q96PQ0 1159 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ACTRT3Q9BYD9 372 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 MAGEH1Q9H213 219 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 SLITRK6Q9H5Y7 841 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 SLC2A4RGQ9NR83 387 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 OR2W5A6NFC9 320 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 C1QTNF3-AMACRE9PGA6 284 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 SYT5O00445 386 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PCDH17O14917 1159 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 DHHO43323 396 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PROM1O43490 865 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 RGS10O43665 173 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 ASNA1O43681 348 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PEX11BO96011 259 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 UQCRC1P31930 480 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 SERPINF1P36955 418 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PDE6CP51160 858 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 ATXN1P54253 815 aaKnown RBP4.09□□□□□ -1.75
LSM6-205ENST00000507449 BCAT1P54687 386 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 TIAL1Q01085 375 aaKnown RBP eCLIP4.09□□□□□ -1.75
LSM6-205ENST00000507449 TMEM95Q3KNT9 176 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 TIGD2Q4W5G0 525 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 MIIPQ5JXC2 388 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 CERCAMQ5T4B2 595 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 FAXCQ5TGI0 409 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 IGFL4Q6B9Z1 124 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 MRNIPQ6NTE8 343 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 LDHAL6AQ6ZMR3 332 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 SPRED1Q7Z699 444 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 MRGPREQ86SM8 312 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 SPARTQ8N0X7 666 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 CCDC150Q8NCX0 1101 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 STT3BQ8TCJ2 826 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PTCD3Q96EY7 689 aaKnown RBP4.09□□□□□ -1.75
LSM6-205ENST00000507449 TPSD1Q9BZJ3 242 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 SLC25A32Q9H2D1 315 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 NRDE2Q9H7Z3 1164 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 ZBTB26Q9HCK0 441 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 AGO4Q9HCK5 861 aaKnown RBP4.09□□□□□ -1.75
LSM6-205ENST00000507449 TMEM8AQ9HCN3 771 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 LUZP4Q9P127 313 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 RIMKLBQ9ULI2 386 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 DTNAQ9Y4J8 743 aa4.09□□□□□ -1.75
LSM6-205ENST00000507449 PIPSLA2A3N6 862 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 WDR27A2RRH5 827 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 LMNAP02545 664 aaKnown RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 ITGA5P08648 1049 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 ITGAMP11215 1152 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 PCSK6P29122 969 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 SLC5A2P31639 672 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 HTR7P34969 479 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 SATB1Q01826 763 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 FSTL1Q12841 308 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 EIF2B5Q13144 721 aaKnown RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 FOXE3Q13461 319 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 TUBA3CQ13748 450 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 CCNIQ14094 377 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 ZRSR2Q15696 482 aaKnown RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 PDCD2Q16342 344 aaPredicted RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 SLC9A4Q6AI14 798 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 ABLIM2Q6H8Q1 611 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 JMJD6Q6NYC1 403 aaPredicted RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 VWA1Q6PCB0 445 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 TUBA3EQ6PEY2 450 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 DTX2Q86UW9 622 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 KRT73Q86Y46 540 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 SUGP1Q8IWZ8 645 aaKnown RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 MYRIPQ8NFW9 859 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 SH3RF3Q8TEJ3 882 aaPredicted RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 SMCR8Q8TEV9 937 aaPredicted RBP4.08□□□□□ -1.76
LSM6-205ENST00000507449 EVI5LQ96CN4 794 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 ZDHHC12Q96GR4 267 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 ADGRA2Q96PE1 1338 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 C17orf80Q9BSJ5 609 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 TMEM120AQ9BXJ8 343 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 DACT1Q9NYF0 836 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 LRFN1Q9P244 771 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 DKK3Q9UBP4 350 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 DNAJB11Q9UBS4 358 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 GPR52Q9Y2T5 361 aa4.08□□□□□ -1.76
LSM6-205ENST00000507449 hCG_1642624A0A1W2PR95 340 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 TLR5O60602 858 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 CBFA2T3O75081 653 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 COQ9O75208 318 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms