RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 AASSQ9UDR5 926 aa3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 HOOK1Q9UJC3 728 aaKnown RBP3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 BLOC1S6Q9UL45 172 aa3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 TRIM17Q9Y577 477 aa3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 SNX13Q9Y5W8 968 aa3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZMYM3Q14202 1370 aa3.96□□□□□ -1.78
HMGB3P15-201ENST00000507326 A6NLC8 198 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 B5MCH6 92 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 EYA2O00167 538 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 FFAR2O15552 330 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 FRS3O43559 492 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 NOL3O60936 208 aaKnown RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TMEM127O75204 238 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 SPDEFO95238 335 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 HSPA4LO95757 839 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 HLA-DOAP06340 250 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 LTA4HP09960 611 aaKnown RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 SRGAP2BP0DMP2 458 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 AKR1B1P15121 316 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 HNF4AP41235 474 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZBTB17Q13105 803 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 RESTQ13127 1097 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 SCARB2Q14108 478 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 PCBP2Q15366 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 SYCP1Q15431 976 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 CCDC178Q5BJE1 867 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 RNF220Q5VTB9 566 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 NUGGCQ68CJ6 796 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 CTR9Q6PD62 1173 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 DRICH1Q6PGQ1 229 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 APOA5Q6Q788 366 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 GLCCI1Q86VQ1 547 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 GLB1L2Q8IW92 636 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 GRAMD1CQ8IYS0 662 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 NRSN1Q8IZ57 195 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 NUP93Q8N1F7 819 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 KRT78Q8N1N4 520 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TSPYL6Q8N831 410 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 FAM156AQ8NDB6 213 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZMIZ2Q8NF64 920 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 RASSF8Q8NHQ8 419 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 FBXO30Q8TB52 745 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 MDM1Q8TC05 714 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 USP6NLQ92738 828 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TFAP2CQ92754 450 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 C1GALT1C1Q96EU7 318 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TMEM41AQ96HV5 264 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZC3H10Q96K80 434 aaKnown RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ASB2Q96Q27 587 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ANO3Q9BYT9 981 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 PDCL3Q9H2J4 239 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TMEM60Q9H2L4 133 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 XAB2Q9HCS7 855 aaKnown RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 INTS10Q9NVR2 710 aaKnown RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 C6orf203Q9P0P8 240 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 SH3BGRL2Q9UJC5 107 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 VPS28Q9UK41 221 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 TMEM5Q9Y2B1 443 aa3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 USP15Q9Y4E8 981 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 COL11A2P13942 1736 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P15-201ENST00000507326 ARHGEF17Q96PE2 2063 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 A0A087WV62 115 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 CAPN8A6NHC0 703 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 GOLGA8AA7E2F4 631 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 TBKBP1A7MCY6 615 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 RTCAO00442 366 aaKnown RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 IPO8O15397 1037 aaKnown RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 SOAT2O75908 522 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 USP1O94782 785 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 RHOXF2BP0C7M4 288 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 MTHFD1P11586 935 aaKnown RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 CDK4P11802 303 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 HLA-DPA1P20036 260 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ABCB4P21439 1286 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 TNFSF4P23510 183 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 MGAT1P26572 445 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 PEX2P28328 305 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 SEMA5AQ13591 1074 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 RASA2Q15283 850 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 MEA1Q16626 185 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 HSP90AA5PQ58FG0 334 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ABHD17BQ5VST6 288 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 CRTC1Q6UUV9 634 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 KDELC1Q6UW63 502 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ABHD15Q6UXT9 468 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 EPHX4Q8IUS5 362 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 DENND1CQ8IV53 801 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 LRRC43Q8N309 656 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 GALNT15Q8N3T1 639 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 CARNMT1Q8N4J0 409 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 TCP11L2Q8N4U5 519 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 BOLLQ8N9W6 283 aaKnown RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 SPC24Q8NBT2 197 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZBTB34Q8NCN2 500 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 SIMC1Q8NDZ2 872 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 BICD2Q8TD16 824 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 SSH3Q8TE77 659 aa3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ARHGEF2Q92974 986 aaKnown RBP3.94□□□□□ -1.78
HMGB3P15-201ENST00000507326 ITFG2Q969R8 447 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms