RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CCR2P41597 374 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 GPD2P43304 727 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 MAGEA11P43364 429 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 TUFMP49411 452 aaKnown RBP9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 MRE11P49959 708 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 PDE6CP51160 858 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 KLHL30Q0D2K2 578 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 TMEM184AQ6ZMB5 413 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 CCDC149Q6ZUS6 474 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 OR8K1Q8NGG5 319 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 CLEC4CQ8WTT0 213 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 ING5Q8WYH8 240 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 FUBP3Q96I24 572 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 MSLNLQ96KJ4 702 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 AGPAT1Q99943 283 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 EDEM3Q9BZQ6 932 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 MIS12Q9H081 205 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 S1PR5Q9H228 398 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 UBE2ZQ9H832 354 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 ST7Q9NRC1 585 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 ARHGAP20Q9P2F6 1191 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 KIAA1257Q9ULG3 409 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 GRXCR2A6NFK2 248 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 DDX3XO00571 662 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 TNFRSF10BO14763 440 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 GJB6O95452 261 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ABL1P00519 1130 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ANXA13P27216 316 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 EIF4A3P38919 411 aaKnown RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC5A3P53794 718 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 EPHB3P54753 998 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 BPIFB4P59827 614 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 RPL10AP62906 217 aaKnown RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CDR2Q01850 454 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CBX2Q14781 532 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 COL19A1Q14993 1142 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC5A9Q2M3M2 681 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 TDRD12Q587J7 1177 aaKnown RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 STXBP5Q5T5C0 1151 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CYP4A22Q5TCH4 519 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 VSTM1Q6UX27 236 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CCDC186Q7Z3E2 898 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF397Q8NF99 534 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ITFG1Q8TB96 612 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 C2orf15Q8WU43 125 aaKnown RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 C8orf48Q96LL4 319 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF512Q96ME7 567 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CPXM1Q96SM3 734 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 SYT11Q9BT88 431 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 LRRC3Q9BY71 257 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ADAM7Q9H2U9 754 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 CSNK1G1Q9HCP0 422 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ABCB6Q9NP58 842 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ABHD10Q9NUJ1 306 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 NUDT5Q9UKK9 219 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 MTCL1Q9Y4B5 1905 aaKnown RBP9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 ATP8B3O60423 1300 aa9.32□□□□□ -0.92
SCAMP1-202ENST00000506858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 MED7O43513 233 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 RHOP08100 348 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 CDC25BP30305 580 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 BCAT1P54687 386 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 CYP4F8P98187 520 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ADIGQ0VDE8 80 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 BST2Q10589 180 aaKnown RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 SMARCB1Q12824 385 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TAF10Q12962 218 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TAF5Q15542 800 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TAF12Q16514 161 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PTPN20Q4JDL3 420 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 DENND5BQ6ZUT9 1274 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GPR149Q86SP6 731 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TMEM150AQ86TG1 271 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 NUP93Q8N1F7 819 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 HLA-CQ95604 372 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 DNAJC7Q99615 494 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ULBP1Q9BZM6 244 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 FAM124BQ9H5Z6 455 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 SFXN1Q9H9B4 322 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 NMUR1Q9HB89 426 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GMIPQ9P107 970 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 MYO6Q9UM54 1294 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PTPRDP23468 1912 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 NOTCH4Q99466 2003 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 A0A087X0T9 212 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 E5RJQ4 531 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms