RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 KHDC1Q4VXA5 237 aaKnown RBP10.01□□□□□ -0.81
PHF3-208ENST00000506783 RYBPQ8N488 228 aaPredicted RBP10.01□□□□□ -0.81
PHF3-208ENST00000506783 PYDC1Q8WXC3 89 aa10.01□□□□□ -0.81
PHF3-208ENST00000506783 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
PHF3-208ENST00000506783 ZNF358Q9NW07 568 aa10.01□□□□□ -0.81
PHF3-208ENST00000506783 WHRNQ9P202 907 aa10.01□□□□□ -0.81
PHF3-208ENST00000506783 USP18Q9UMW8 372 aa10.01□□□□□ -0.81
PHF3-208ENST00000506783 C15orf41Q9Y2V0 281 aa10.01□□□□□ -0.81
PHF3-208ENST00000506783 A6NJR5 290 aa10□□□□□ -0.81
PHF3-208ENST00000506783 RGS20O76081 388 aa10□□□□□ -0.81
PHF3-208ENST00000506783 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
PHF3-208ENST00000506783 RARBP10826 455 aa10□□□□□ -0.81
PHF3-208ENST00000506783 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.812e-6■□□□□ 10.1
PHF3-208ENST00000506783 SLC25A3Q00325 362 aa10□□□□□ -0.81
PHF3-208ENST00000506783 LAMTOR4Q0VGL1 99 aa10□□□□□ -0.81
PHF3-208ENST00000506783 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 FAM47CQ5HY64 1035 aa10□□□□□ -0.81
PHF3-208ENST00000506783 ATF7IP2Q5U623 682 aa10□□□□□ -0.81
PHF3-208ENST00000506783 TRMT10BQ6PF06 316 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 LAYNQ6UX15 382 aa10□□□□□ -0.81
PHF3-208ENST00000506783 LMNTD2Q8IXW0 634 aa10□□□□□ -0.81
PHF3-208ENST00000506783 PYROXD2Q8N2H3 581 aa10□□□□□ -0.81
PHF3-208ENST00000506783 ATP11CQ8NB49 1132 aa10□□□□□ -0.81
PHF3-208ENST00000506783 CLEC4CQ8WTT0 213 aa10□□□□□ -0.81
PHF3-208ENST00000506783 UCMAQ8WVF2 138 aa10□□□□□ -0.81
PHF3-208ENST00000506783 AZIN2Q96A70 460 aa10□□□□□ -0.81
PHF3-208ENST00000506783 RAB3IPQ96QF0 476 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 MINDY3Q9H8M7 445 aa10□□□□□ -0.81
PHF3-208ENST00000506783 RXFP1Q9HBX9 757 aa10□□□□□ -0.81
PHF3-208ENST00000506783 MFHAS1Q9Y4C4 1052 aa10□□□□□ -0.81
PHF3-208ENST00000506783 CEP290O15078 2479 aa10□□□□□ -0.81
PHF3-208ENST00000506783 A8MXQ7 604 aa10□□□□□ -0.81
PHF3-208ENST00000506783 DNALI1O14645 258 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 NELFEP18615 380 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 GEMIN4P57678 1058 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 ZNF200P98182 395 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 HABP4Q5JVS0 413 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 TEX2Q8IWB9 1127 aa10□□□□□ -0.81
PHF3-208ENST00000506783 RCOR2Q8IZ40 523 aa10□□□□□ -0.81
PHF3-208ENST00000506783 CCNYL1Q8N7R7 359 aa10□□□□□ -0.81
PHF3-208ENST00000506783 DDX1Q92499 740 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 RUBCNQ92622 972 aa10□□□□□ -0.81
PHF3-208ENST00000506783 MRPL4Q9BYD3 311 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 HESX1Q9UBX0 185 aa10□□□□□ -0.81
PHF3-208ENST00000506783 WASF2Q9Y6W5 498 aa10□□□□□ -0.81
PHF3-208ENST00000506783 URB1O60287 2271 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 E9PBE3 544 aa10□□□□□ -0.81
PHF3-208ENST00000506783 SPTLC1O15269 473 aa10□□□□□ -0.81
PHF3-208ENST00000506783 KLHL41O60662 606 aa10□□□□□ -0.81
PHF3-208ENST00000506783 SUPT20HL2P0C7V6 817 aa10□□□□□ -0.81
PHF3-208ENST00000506783 FGFR1P11362 822 aa10□□□□□ -0.81
PHF3-208ENST00000506783 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 UBA1P22314 1058 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 AMPD1P23109 780 aa10□□□□□ -0.81
PHF3-208ENST00000506783 ZNF157P51786 506 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 TSNAXIP1Q2TAA8 658 aa10□□□□□ -0.81
PHF3-208ENST00000506783 PREPLQ4J6C6 727 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 PPM1JQ5JR12 505 aa10□□□□□ -0.81
PHF3-208ENST00000506783 BTNL9Q6UXG8 535 aa10□□□□□ -0.81
PHF3-208ENST00000506783 FAM13CQ8NE31 585 aa10□□□□□ -0.81
PHF3-208ENST00000506783 FAM81BQ96LP2 452 aa10□□□□□ -0.81
PHF3-208ENST00000506783 LGMNQ99538 433 aa10□□□□□ -0.81
PHF3-208ENST00000506783 NIF3L1Q9GZT8 377 aa10□□□□□ -0.81
PHF3-208ENST00000506783 DENND2DQ9H6A0 471 aaPredicted RBP10□□□□□ -0.81
PHF3-208ENST00000506783 CYP39A1Q9NYL5 469 aa10□□□□□ -0.81
PHF3-208ENST00000506783 KIAA0100Q14667 2235 aaKnown RBP10□□□□□ -0.81
PHF3-208ENST00000506783 BTNL10A8MVZ5 291 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 MOCS2O96007 188 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 UNGP13051 313 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 NDST1P52848 882 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 DCAF6Q58WW2 860 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 C6orf163Q5TEZ5 329 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 RNF220Q5VTB9 566 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PID1Q7Z2X4 250 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 PIGWQ7Z7B1 504 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 TRABD2AQ86V40 505 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 KIAA0319LQ8IZA0 1049 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 FBXO27Q8NI29 283 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 LENG1Q96BZ8 264 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 MAGEB18Q96M61 343 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 CXorf49A8MYA2 514 aaPredicted RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 AIM2O14862 343 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 IRF6O14896 467 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 LRCH4O75427 683 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 SORBS2O94875 1100 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 PTGER2P43116 358 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 VCPP55072 806 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 NME5P56597 212 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 ITKQ08881 620 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 XRCC4Q13426 336 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 RABGAP1LQ5R372 815 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 RWDD4Q6NW29 188 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 GALNT4Q8N4A0 578 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 MIEF2Q96C03 454 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 NAF1Q96HR8 494 aaKnown RBP9.99□□□□□ -0.81
PHF3-208ENST00000506783 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 NMUR2Q9GZQ4 415 aa9.99□□□□□ -0.81
PHF3-208ENST00000506783 NMRK2Q9NPI5 230 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms