RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CKMP06732 381 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 KRT13P13646 458 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ARSAP15289 507 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 HDCP19113 662 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 GTF2H1P32780 548 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PIK3CAP42336 1068 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PRCPP42785 496 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 GCLMP48507 274 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PDE6CP51160 858 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 NDST1P52848 882 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC7A9P82251 487 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ZXDBP98169 803 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TAF10Q12962 218 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 LRRC32Q14392 662 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 MTF1Q14872 753 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PON2Q15165 354 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PDGFRLQ15198 375 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ZNF658Q5TYW1 1059 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TRIM68Q6AZZ1 485 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ACOT1Q86TX2 421 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 SYNPOQ8N3V7 929 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 SPEM1Q8N4L4 309 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 KIAA1958Q8N8K9 716 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 SUMF1Q8NBK3 374 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ZMIZ2Q8NF64 920 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 OSCP1Q8WVF1 389 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 OVCA2Q8WZ82 227 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 SMARCD1Q96GM5 515 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 FAM126AQ9BYI3 521 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TMEM8AQ9HCN3 771 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 CSNK1G1Q9HCP0 422 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TRPC7Q9HCX4 862 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 DMAP1Q9NPF5 467 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 RBM12Q9NTZ6 932 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ZSCAN32Q9NX65 697 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 PCDHA5Q9Y5H7 936 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ATP8B3O60423 1300 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 RTN3O95197 1032 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 YWHAQP27348 245 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 CCR3P51677 355 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 PMS1P54277 932 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 EML3Q32P44 896 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 SNX30Q5VWJ9 437 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 KRT39Q6A163 491 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 FSTL4Q6MZW2 842 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 CC2D1AQ6P1N0 951 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 TSSK4Q6SA08 328 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 Q6ZS52 159 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 ADSSL1Q8N142 457 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 NUP93Q8N1F7 819 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 SH3RF2Q8TEC5 729 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 ERCC4Q92889 916 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 EEF2KMTQ96G04 330 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 FAXDC2Q96IV6 333 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 SLITRK1Q96PX8 696 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 TWNKQ96RR1 684 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 SMOQ99835 787 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 IMPG2Q9BZV3 1241 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 NIF3L1Q9GZT8 377 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 RNF38Q9H0F5 515 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 ECT2Q9H8V3 914 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 KRT82Q9NSB4 513 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 VPS13AQ96RL7 3174 aa9.63□□□□□ -0.87
PDLIM5-209ENST00000506632 K7ESF4 209 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 LEFTY2O00292 366 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CETN3O15182 167 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC16A3O15427 465 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 KINO60870 393 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CILPO75339 1184 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 AP1G2O75843 785 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 BEST1O76090 585 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SMC2O95347 1197 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 EPB41P11171 864 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CCDC130P13994 396 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 HOXA6P31267 233 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 GJA4P35212 333 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CXCL12P48061 93 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 MXI1P50539 228 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC5A3P53794 718 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SATB1Q01826 763 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 LRRC63Q05C16 580 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 ORC1Q13415 861 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 GAB4Q2WGN9 574 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 ANKRD40Q6AI12 368 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CPA6Q8N4T0 437 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 PDZD8Q8NEN9 1154 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SCAMP5Q8TAC9 235 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC2A14Q8TDB8 520 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SEMA4DQ92854 862 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 SMARCE1Q969G3 411 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 FBXO32Q969P5 355 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms