RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 P4HA2O15460 535 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 LILRB5O75023 590 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 AP1G2O75843 785 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ERCC5P28715 1186 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ADORA2BP29275 332 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 RPS9P46781 194 aaKnown RBP13.91□□□□□ -0.18
TCOF1-209ENST00000506630 IFRD2Q12894 506 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-209ENST00000506630 CUL2Q13617 745 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ZNF394Q53GI3 561 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 HSP90AA4PQ58FG1 418 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 FAM78AQ5JUQ0 283 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 CRYBG2Q8N1P7 616 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 C12orf29Q8N999 325 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-209ENST00000506630 SLC2A14Q8TDB8 520 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 SMARCD2Q92925 531 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 CLDN23Q96B33 292 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 SMARCD1Q96GM5 515 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 FAXDC2Q96IV6 333 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 SPATA17Q96L03 361 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ASB16Q96NS5 453 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 NT5C1BQ96P26 610 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 THAP9Q9H5L6 903 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 ZFP14Q9HCL3 533 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 RAB23Q9ULC3 237 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 FANCMQ8IYD8 2048 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 DCDC2BA2VCK2 349 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 SHISA7A6NL88 538 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 PMM2O15305 246 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 ECI2O75521 394 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 F11P03951 625 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TARSP26639 723 aaKnown RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 YWHAEP62258 255 aaKnown RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 STX1AQ16623 288 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TANGO2Q6ICL3 276 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TSSK4Q6SA08 328 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 FUKQ8N0W3 1084 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 PPM1KQ8N3J5 372 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TTC39CQ8N584 583 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 MRPS31Q92665 395 aaKnown RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 NELL1Q92832 810 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 C8orf48Q96LL4 319 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TMEM30AQ9NV96 361 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 GCNT4Q9P109 453 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TMEM63CQ9P1W3 806 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 COL4A2P08572 1712 aa13.9□□□□□ -0.18
TCOF1-209ENST00000506630 TPRP12270 2363 aaKnown RBP13.89□□□□□ -0.19
TCOF1-209ENST00000506630 TADA3O75528 432 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 FCARP24071 287 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 NRLP54845 237 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 USP46P62068 366 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 GRM2Q14416 872 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 IRF2BP1Q8IU81 584 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 ELSPBP1Q96BH3 223 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 HEXIM2Q96MH2 286 aaKnown RBP13.89□□□□□ -0.19
TCOF1-209ENST00000506630 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 TASP1Q9H6P5 420 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 ANO10Q9NW15 660 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
TCOF1-209ENST00000506630 DNAH14Q0VDD8 3507 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 MAN2B1O00754 1011 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 DPYSL4O14531 572 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 VIPR2P41587 438 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 ST3GAL2Q16842 350 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 PPP1R26Q5T8A7 1209 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 C11orf57Q6ZUT1 292 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 ARHGEF19Q8IW93 802 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 MAB21L3Q8N8X9 362 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 EHBP1Q8NDI1 1231 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 LMO3Q8TAP4 145 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 KAT5Q92993 513 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms