RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 PPP1R26Q5T8A7 1209 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 ACOT1Q86TX2 421 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 LGALS13Q9UHV8 139 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 SGK1O00141 431 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 FBXO21O94952 628 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 PHBP35232 272 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 LHX1P48742 406 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 MAGOHP61326 146 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 BZW1Q7L1Q6 419 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 OR2W6PQ8NHA6 318 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 HNRNPABQ99729 332 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 PFKMP08237 780 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 KRT10P13645 584 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 CRHR2Q13324 411 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 PCSK9Q8NBP7 692 aaKnown RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 NDUFAB1O14561 156 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 HPDP32754 393 aaPredicted RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 MMP13P45452 471 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 AIF1P55008 147 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 HNRNPH2P55795 449 aaKnown RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 OTUD4Q01804 1114 aaKnown RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 SERINC5Q86VE9 423 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 FAM228AQ86W67 206 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 TDRPQ86YL5 185 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ACTL9Q8TC94 416 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 KCTD13Q8WZ19 329 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 FERMT1Q9BQL6 677 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 TRIM62Q9BVG3 475 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 SPAG6O75602 509 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 FAM107AO95990 144 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ZNF135P52742 658 aaPredicted RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ARL4CP56559 192 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 BEX3Q00994 111 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ROR1Q01973 937 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 GPS1Q13098 491 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 NOMO1Q15155 1222 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ATP13A4Q4VNC1 1196 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 ANKS1BQ7Z6G8 1248 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 PGBD4Q96DM1 585 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 RBM15Q96T37 977 aaKnown RBP eCLIP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 PRDM4Q9UKN5 801 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
NFKB1-205ENST00000505458 TRIP12Q14669 1992 aaPredicted RBP11.85□□□□□ -0.51
NFKB1-205ENST00000505458 NR2C2P49116 596 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 CDH6P55285 790 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 PDE4CQ08493 712 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 XRCC4Q13426 336 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 CDKL3Q8IVW4 592 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 EMC1Q8N766 993 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 SMG8Q8ND04 991 aaKnown RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 KBTBD7Q8WVZ9 684 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 UROC1Q96N76 676 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 APOL6Q9BWW8 343 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 NINJ2Q9NZG7 142 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 APOL1O14791 398 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 IL1R2P27930 398 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 MAGEA4P43358 317 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 EIF3EP60228 445 aaKnown RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 RNASEH2BQ5TBB1 312 aaKnown RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 MRPL10Q7Z7H8 261 aaKnown RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 FAF2Q96CS3 445 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 SENP6Q9GZR1 1112 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 NSRP1Q9H0G5 558 aaKnown RBP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 CCDC134Q9H6E4 229 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 PAK5Q9P286 719 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 STAP1Q9ULZ2 295 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 TP73O15350 636 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 ZNF623O75123 536 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 DAB1O75553 588 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 TCF4P15884 667 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 ORC1Q13415 861 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 PMF1Q6P1K2 205 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 TMEM40Q8WWA1 233 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 CALN1Q9BXU9 219 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.84□□□□□ -0.51
NFKB1-205ENST00000505458 DSEQ9UL01 958 aa11.84□□□□□ -0.51
NFKB1-205ENST00000505458 FAM155AB1AL88 458 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms