RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 RBM15BQ8NDT2 890 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 GPRASP2Q96D09 838 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 ATG4CQ96DT6 458 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 TRIM56Q9BRZ2 755 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PORCNQ9H237 461 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 UGT1A7Q9HAW7 530 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 UGT1A10Q9HAW8 530 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 UGT1A8Q9HAW9 530 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 B2RBV5 119 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 H3BRJ5 948 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 AP1G2O75843 785 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 ENO1P06733 434 aaKnown RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 KRT3P12035 628 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 CCND2P30279 289 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 CDH5P33151 784 aaPredicted RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 EIF3EP60228 445 aaKnown RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 IMPG2Q9BZV3 1241 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 VWA5AO00534 786 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 RBP3P10745 1247 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 NEFHP12036 1026 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 ARL2P36404 184 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 PANX3Q96QZ0 392 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 CPXM1Q96SM3 734 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 MMADHCQ9H3L0 296 aaPredicted RBP12.41□□□□□ -0.42
UBE3D-206ENST00000505226 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
UBE3D-206ENST00000505226 TOP3BO95985 862 aaKnown RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 EIF4BP23588 611 aaKnown RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 CACNA2D1P54289 1103 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 YWHAGP61981 247 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 BST1Q10588 318 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 FSTL1Q12841 308 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 MTMR2Q13614 643 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 DEPTORQ8TB45 409 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 HSPH1Q92598 858 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 FAM161BQ96MY7 647 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 PEBP4Q96S96 227 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 TUBB6Q9BUF5 446 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 DHX33Q9H6R0 707 aaKnown RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 MARCOQ9UEW3 520 aaPredicted RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 IQANK1A0A1B0GTG1 560 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 TRIM49D1C9J1S8 452 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 KITP10721 976 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 RAP1GDS1P52306 607 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 CWF19L1Q69YN2 538 aaKnown RBP12.4□□□□□ -0.42
UBE3D-206ENST00000505226 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 LPAR1Q92633 364 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.42
UBE3D-206ENST00000505226 STAM2O75886 525 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 INHBAP08476 426 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 SKIP12755 728 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 KCNA3P22001 575 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 MIPP30301 263 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 ASPAP45381 313 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 KDSRQ06136 332 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 KCTD6Q8NC69 237 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.43
UBE3D-206ENST00000505226 CFAP61Q8NHU2 1237 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 CFAP36Q96G28 342 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.4□□□□□ -0.43
UBE3D-206ENST00000505226 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 POLIQ9UNA4 740 aa12.4□□□□□ -0.43
UBE3D-206ENST00000505226 APOC4-APOC2K7ER74 178 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 RFPL1O75677 317 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 IL1BP01584 269 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 APOC2P02655 101 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ERBB2P04626 1255 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 UBTFL6P0CB48 400 aaPredicted RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 NAMPTP43490 491 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 RAB27AP51159 221 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 BMPR2Q13873 1038 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ARID3BQ8IVW6 561 aaPredicted RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 GALNT15Q8N3T1 639 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 STMN2Q93045 179 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SLC13A1Q9BZW2 595 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms