RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CLPBQ9H078 707 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TMEM206Q9H813 350 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POLR3EQ9NVU0 708 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DLGAP2Q9P1A6 1054 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NXF1Q9UBU9 619 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POU2F3Q9UKI9 436 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PCDHA13Q9Y5I0 950 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TAF6LQ9Y6J9 622 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SCN4AP35499 1836 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 THSD7BQ9C0I4 1608 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TTC26A0AVF1 554 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TCP10L2B9ZVM9 353 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TK2O00142 265 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PGRMC1O00264 195 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POLRMTO00411 1230 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PALMO75781 387 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SULT1C4O75897 302 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PDE8BO95263 885 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PIGNO95427 931 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 LCA5LO95447 670 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NTSR2O95665 410 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NPR1P16066 1061 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DRD4P21917 467 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNA3P22001 575 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 EEF1B2P24534 225 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ECHS1P30084 290 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SOX11P35716 441 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GJA9P57773 515 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGAP4P98171 946 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FKBP3Q00688 224 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PTPN12Q05209 780 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GFPT1Q06210 699 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ENPEPQ07075 957 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT81Q14533 505 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 AOC3Q16853 763 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DCAF6Q58WW2 860 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 JADE1Q6IE81 842 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 OGFOD3Q6PK18 319 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNYQ8ND76 341 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 OR2W6PQ8NHA6 318 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PI4K2BQ8TCG2 481 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 AGR3Q8TD06 166 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DTX3LQ8TDB6 740 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PIGOQ8TEQ8 1089 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DHX38Q92620 1227 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CDKL2Q92772 493 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP2A3Q93084 1043 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SKA1Q96BD8 255 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC124Q96CT7 223 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PAGE5Q96GU1 130 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MAP6Q96JE9 813 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 AIFM2Q9BRQ8 373 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC2A11Q9BYW1 496 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 BCL2L14Q9BZR8 327 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GOLPH3Q9H4A6 298 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 UBE2TQ9NPD8 197 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 EMILIN3Q9NT22 766 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 RAB20Q9NX57 234 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 STARD13Q9Y3M8 1113 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM17Q9Y577 477 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GPC6Q9Y625 555 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SDK1Q7Z5N4 2213 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KLRG2A4D1S0 409 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POTEMA6NI47 508 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM196BA6NMK8 535 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PDHXO00330 501 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PSMD14O00487 310 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 HNRNPDLO14979 420 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ECE2O60344 883 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MFAP3LO75121 409 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 WFS1O76024 890 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KLHL2O95198 593 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GOT2P00505 430 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NR3C2P08235 984 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FECHP22830 423 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CCND1P24385 295 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MAPK4P31152 587 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 HOXA13P31271 388 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NSFP46459 744 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PRAMEP78395 509 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FOXO4P98177 505 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 IL9RQ01113 521 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POU5F1BQ06416 359 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 HABP4Q5JVS0 413 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NANOGP8Q6NSW7 305 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NLRX1Q86UT6 975 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NIM1KQ8IY84 436 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CPA6Q8N4T0 437 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SRBD1Q8N5C6 995 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 C2orf69Q8N8R5 385 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KCT2Q8NC54 265 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC44A5Q8NCS7 719 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NLGN2Q8NFZ4 835 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 OR6C4Q8NGE1 309 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NAT14Q8WUY8 206 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 OSCP1Q8WVF1 389 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MS4A14Q96JA4 679 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FAR2Q96K12 515 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms