RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CCND1P24385 295 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 HOXD9P28356 352 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 CDC25AP30304 524 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 GPSM2P81274 684 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 BOP1Q14137 746 aaKnown RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 E2F2Q14209 437 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 IQCB1Q15051 598 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCBP2Q15366 365 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 AMOTQ4VCS5 1084 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 EGFLAMQ63HQ2 1017 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 FCRL6Q6DN72 434 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 CAPRIN2Q6IMN6 1127 aaKnown RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 KIRREL2Q6UWL6 708 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 SERPINA13PQ6UXR4 307 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 CUZD1Q86UP6 607 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 TERB1Q8NA31 727 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 XAGE5Q8WWM1 108 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 ATG4AQ8WYN0 398 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 R3HDM4Q96D70 268 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 MTMR8Q96EF0 704 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 FAM167AQ96KS9 214 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 MACROD1Q9BQ69 325 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 MRPL46Q9H2W6 279 aaKnown RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 LMBRD1Q9NUN5 540 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 TFCP2L1Q9NZI6 479 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 USP35Q9P2H5 1018 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 HEY2Q9UBP5 337 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 ATP8A1Q9Y2Q0 1164 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 MMP24Q9Y5R2 645 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 BTBD19C9JJ37 291 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 GABRDO14764 452 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 EXOC3O60645 756 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 RNF8O76064 485 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 CAMTA2O94983 1202 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 AHSGP02765 367 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 FTLP02792 175 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 GUCY2FP51841 1108 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 HK3P52790 923 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 SETQ01105 290 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 TMEM63BQ5T3F8 832 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 RGS7BPQ6MZT1 257 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 Q6ZWC4 215 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 TICAM2Q86XR7 235 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 ANKRD13BQ86YJ7 626 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 PELI3Q8N2H9 469 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZNF398Q8TD17 642 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 BRIX1Q8TDN6 353 aaKnown RBP2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 ADAMTS18Q8TE60 1221 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 GLG1Q92896 1179 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 NAP1L5Q96NT1 182 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 SPC25Q9HBM1 224 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 SHOC2Q9UQ13 582 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 SSX2IPQ9Y2D8 614 aa2.6□□□□□ -1.99
HMGB3P17-201ENST00000504195 DCLK1O15075 740 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PRKCBP05771 671 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 TYRP14679 529 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PDCP20941 246 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 VIPR2P41587 438 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PDE6CP51160 858 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 LILRA4P59901 499 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 SP2Q02086 613 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZNF91Q05481 1191 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 MTMR1Q13613 665 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 SF3B4Q15427 424 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PTPN21Q16825 1174 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 CCDC157Q569K6 752 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 L1TD1Q5T7N2 865 aaKnown RBP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 EMC10Q5UCC4 262 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PPP1R3BQ86XI6 285 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 SLC15A3Q8IY34 581 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCSK9Q8NBP7 692 aaKnown RBP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 B4GALNT2Q8NHY0 566 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 OSR1Q8TAX0 266 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 EFHD1Q9BUP0 239 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 DPCDQ9BVM2 203 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 SLC13A1Q9BZW2 595 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 CCDC8Q9H0W5 538 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PNPOQ9NVS9 261 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PLEKHM1Q9Y4G2 1056 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHA1Q9Y5I3 950 aa2.59□□□□□ -1.99
HMGB3P17-201ENST00000504195 ERI2A8K979 691 aaKnown RBP2.58□□□□□ -2
HMGB3P17-201ENST00000504195 H3BUI4 141 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 FOXN3O00409 490 aaPredicted RBP2.58□□□□□ -2
HMGB3P17-201ENST00000504195 ERC2O15083 957 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 UNC5CO95185 931 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 PDE8BO95263 885 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 GRPP07492 148 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 NGFRP08138 427 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 LRPAP1P30533 357 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 RENBPP51606 427 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 RPS13P62277 151 aaKnown RBP2.58□□□□□ -2
HMGB3P17-201ENST00000504195 EXOSC9Q06265 439 aaKnown RBP2.58□□□□□ -2
HMGB3P17-201ENST00000504195 ODF1Q14990 250 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 FAM187BQ17R55 369 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 ZNF324BQ6AW86 544 aaPredicted RBP2.58□□□□□ -2
HMGB3P17-201ENST00000504195 HIST2H2BCQ6DN03 193 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 USP45Q70EL2 814 aa2.58□□□□□ -2
HMGB3P17-201ENST00000504195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms