RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 CCDC142Q17RM4 750 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 TAOK1Q7L7X3 1001 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 SESTD1Q86VW0 696 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 ARHGEF2Q92974 986 aaKnown RBP23.55■■□□□ 1.36
PCDH1-204ENST00000503492 GOLGA2P5Q9HBQ8 144 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 DPYSL4O14531 572 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 PDGFRBP09619 1106 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 QPCTQ16769 361 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 CHADLQ6NUI6 762 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 PRCCQ92733 491 aaPredicted RBP23.54■■□□□ 1.36
PCDH1-204ENST00000503492 B3GNT5Q9BYG0 378 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 SHOC2Q9UQ13 582 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 KPNA7A9QM74 516 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 PRPSAP2O60256 369 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 KCNE1P15382 129 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 LMO2P25791 158 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 PURAQ00577 322 aaKnown RBP23.54■■□□□ 1.36
PCDH1-204ENST00000503492 FASTKD3Q14CZ7 662 aaKnown RBP23.54■■□□□ 1.36
PCDH1-204ENST00000503492 FSCN1Q16658 493 aaKnown RBP23.54■■□□□ 1.36
PCDH1-204ENST00000503492 ZNF618Q5T7W0 954 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 UNC45BQ8IWX7 931 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 C7orf31Q8N865 590 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 ARRDC4Q8NCT1 418 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 APBA2Q99767 749 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 KATNAL1Q9BW62 490 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 FARP1Q9Y4F1 1045 aaPredicted RBP23.54■■□□□ 1.36
PCDH1-204ENST00000503492 IPPQ9Y573 584 aa23.54■■□□□ 1.36
PCDH1-204ENST00000503492 PCNTO95613 3336 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 FOXO6A8MYZ6 492 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 ABHD2P08910 425 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 CCDC130P13994 396 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 HOXC8P31273 242 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 EIF3EP60228 445 aaKnown RBP23.53■■□□□ 1.36
PCDH1-204ENST00000503492 DPYSL3Q14195 570 aa23.53■■□□□ 1.36
PCDH1-204ENST00000503492 SMG8Q8ND04 991 aaKnown RBP23.53■■□□□ 1.36
PCDH1-204ENST00000503492 CREB1P16220 341 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 RPL22P35268 128 aaKnown RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 CORO7P57737 925 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 STAT4Q14765 748 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 NPNTQ6UXI9 565 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 CYP4X1Q8N118 509 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 STK32AQ8WU08 396 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 RSAD2Q8WXG1 361 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 NGRNQ9NPE2 291 aaKnown RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 INTS9Q9NV88 658 aaKnown RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 GDAP2Q9NXN4 497 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 GNL1P36915 607 aaPredicted RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 CTCFP49711 727 aaPredicted RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 HP1BP3Q5SSJ5 553 aaPredicted RBP23.52■■□□□ 1.36
PCDH1-204ENST00000503492 IFNL1Q8IU54 200 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 CRYBG2Q8N1P7 616 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 ZNF560Q96MR9 790 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 NMRK2Q9NPI5 230 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 LGALS13Q9UHV8 139 aa23.52■■□□□ 1.36
PCDH1-204ENST00000503492 MYADML2A6NDP7 307 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 TRIM66O15016 1216 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 ADORA2BP29275 332 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 SCYL2Q6P3W7 929 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 NME8Q8N427 588 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 SPATA18Q8TC71 538 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 FAM172AQ8WUF8 416 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 CPT1BQ92523 772 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 MAK16Q9BXY0 300 aaKnown RBP23.51■■□□□ 1.35
PCDH1-204ENST00000503492 GPATCH2LQ9NWQ4 482 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 C5orf60A6NFR6 353 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 MCF2LO15068 1137 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 RBP3P10745 1247 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 ATP5DP30049 168 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 GAD2Q05329 585 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 ANKRD22Q5VYY1 191 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 ANKRD52Q8NB46 1076 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 CCDC77Q9BR77 488 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 EURLQ9NYK6 297 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 NAALADL1Q9UQQ1 740 aa23.51■■□□□ 1.35
PCDH1-204ENST00000503492 GOLGA8MH3BSY2 632 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 NDC80O14777 642 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 ALOX15BO15296 676 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 XPOTO43592 962 aaKnown RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 DRD4P21917 467 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 SDC4P31431 198 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 TAF6P49848 677 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 ZC3H12AQ5D1E8 599 aaKnown RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 LIMS2Q7Z4I7 341 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 PCGF5Q86SE9 256 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 FAM228AQ86W67 206 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 FAM71DQ8N9W8 422 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 CLEC4CQ8WTT0 213 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 CHMP6Q96FZ7 201 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 ZNF317Q96PQ6 595 aaPredicted RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 RNF157Q96PX1 679 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 TBK1Q9UHD2 729 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 TRPM7Q96QT4 1865 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 A0A087WUV0 522 aaPredicted RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 TNPO2O14787 897 aaKnown RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 CDH16O75309 829 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 IL4RP24394 825 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 PNPLA4P41247 253 aa23.5■■□□□ 1.35
PCDH1-204ENST00000503492 BST2Q10589 180 aaKnown RBP23.5■■□□□ 1.35
PCDH1-204ENST00000503492 NOMO1Q15155 1222 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms