RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KLF9Q13886 244 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 BOP1Q14137 746 aaKnown RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 MIDNQ504T8 468 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 C10orf62Q5T681 223 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 DCAF12L1Q5VU92 463 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 UNC13DQ70J99 1090 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 PEG10Q86TG7 708 aaKnown RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 ATP11CQ8NB49 1132 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 VPS37AQ8NEZ2 397 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 DENND1AQ8TEH3 1009 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 RAPGEF4Q8WZA2 1011 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 PGBD1Q96JS3 809 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 ARPC5LQ9BPX5 153 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TTYH3Q9C0H2 523 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 MS4A7Q9GZW8 240 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 SMOC2Q9H3U7 446 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 CERS4Q9HA82 394 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 STARD7Q9NQZ5 370 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 ETAA1Q9NY74 926 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 CTTNBP2NLQ9P2B4 639 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 HESX1Q9UBX0 185 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 ITGB1BP2Q9UKP3 347 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 PAXBP1Q9Y5B6 917 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRGV11A0A075B6L2 103 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 A0A1W2PS29 197 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MBD3L4A6NDZ8 208 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MBD3L3A6NE82 208 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PPEF2O14830 753 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 DCLK1O15075 740 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 RASSF9O75901 435 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SUN1O94901 812 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MT-ND5P03915 603 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SETSIPP0DME0 302 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 KCNA2P16389 499 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 ABCB4P21439 1286 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CCKARP32238 428 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 VIPR2P41587 438 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CARSP49589 748 aaKnown RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 TOB1P50616 345 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 POLGP54098 1239 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 HTRA4P83105 476 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MC2RQ01718 297 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 FPGSQ05932 587 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 IQCB1Q15051 598 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 ETFDHQ16134 617 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CD300EQ496F6 205 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 LONRF3Q496Y0 759 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PLA1AQ53H76 456 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 IZUMO3Q5VZ72 239 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 HIBCHQ6NVY1 386 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 TAF2Q6P1X5 1199 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 C1orf228Q6PIY5 440 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 RNF44Q7L0R7 432 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CLNKQ7Z7G1 428 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CERS3Q8IU89 383 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 RNF152Q8N8N0 203 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 Q8NA96 180 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PSD4Q8NDX1 1056 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 DEPTORQ8TB45 409 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 POC1BQ8TC44 478 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SPSB4Q96A44 273 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 KIAA1191Q96A73 305 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 IQCDQ96DY2 449 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 HMCESQ96FZ2 354 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SNX22Q96L94 193 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SLC46A1Q96NT5 459 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 MOGAT1Q96PD6 335 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 CHST8Q9H2A9 424 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 ARFGAP3Q9NP61 516 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PLCB1Q9NQ66 1216 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 SERHLQ9NQF3 203 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 GJB4Q9NTQ9 266 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 TBC1D23Q9NUY8 699 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZSCAN32Q9NX65 697 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 HDAC9Q9UKV0 1011 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PADI4Q9UM07 663 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 NEU2Q9Y3R4 380 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 RAD54BQ9Y620 910 aa2.94□□□□□ -1.94
HMGB1P35-201ENST00000503360 PRAMEF33A0A0G2JMD5 474 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ABHD14A-ACY1A0A1B0GW23 586 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 A0A1W2PPC4 97 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PLEKHD1A6NEE1 506 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 E7ENX8 843 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 THAP12O43422 761 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PRAMEF10O60809 474 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 FGF18O76093 207 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ANXA2P07355 339 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ATXN1LP0C7T5 689 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 SNHG28P0DPA3 235 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 TXNP10599 105 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 CYP2C9P11712 490 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 HARSP12081 509 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 XRCC6P12956 609 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 IL1R1P14778 569 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ITGALP20701 1170 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 KLRC1P26715 233 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 GCLCP48506 637 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PXNP49023 591 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms