RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 LRRCC1Q9C099 1032 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PNNQ9H307 717 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 GPR108Q9NPR9 543 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 HOMER3Q9NSC5 361 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TMED5Q9Y3A6 229 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 HMGXB3Q12766 1538 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SPATA31C2B4DYI2 1134 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 H0YCG3 227 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PGRMC2O15173 223 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CAMTA2O94983 1202 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PCDH8O95206 1070 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CD2BP2O95400 341 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 ITGA5P08648 1049 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PRG2P13727 222 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SAT1P21673 171 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KLRK1P26718 216 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KCNJ4P48050 445 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DIO1P49895 249 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KCNQ4P56696 695 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 IRX1P78414 480 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 HTD2P86397 168 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PPARAQ07869 468 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PTK6Q13882 451 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CCDC57Q2TAC2 916 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 METTL11BQ5VVY1 283 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MFSD5Q6N075 450 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 FAM160B2Q86V87 743 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KSR1Q8IVT5 923 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 GALNT4Q8N4A0 578 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DPP10Q8N608 796 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SETD6Q8TBK2 473 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 FAM216AQ8WUB2 273 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.98□□□□□ -1.77
SUB1-202ENST00000502453 HPS1Q92902 700 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 FER1L6-AS2Q96M78 137 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ATP6V0BQ99437 205 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SPXQ9BT56 116 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PCDHAC1Q9H158 963 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TAOK3Q9H2K8 898 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DNAJB12Q9NXW2 375 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 SMARCA2P51531 1590 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 TMEM233B4DJY2 109 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 GPR89AB7ZAQ6 455 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 E7EVH7 732 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ZNF263O14978 683 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 LRRN2O75325 713 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 PDE8BO95263 885 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 STAMBPO95630 424 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 RPLP2P05387 115 aaKnown RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 SLFN14P0C7P3 912 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 GPR89BP0CG08 455 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 MYBL1P10243 752 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 CA8P35219 290 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 BCL6P41182 706 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ASMTP46597 345 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 CD83Q01151 205 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 EXOSC9Q06265 439 aaKnown RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 KCNAB2Q13303 367 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 GARNL3Q5VVW2 1013 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ZCCHC12Q6PEW1 402 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ATG14Q6ZNE5 492 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 POGLUT1Q8NBL1 392 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 OR6Y1Q8NGX8 325 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 SPATA20Q8TB22 786 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 CYFIP2Q96F07 1278 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 FAM84AQ96KN4 292 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 GCNAQ96QF7 691 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 TUBGCP5Q96RT8 1024 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 PFDN4Q9NQP4 134 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 HCSTQ9UBK5 93 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 PEX12O00623 359 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 NKRFO15226 690 aaKnown RBP eCLIP3.97□□□□□ -1.77
SUB1-202ENST00000502453 PRKCBP05771 671 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 NR2C2P49116 596 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 LUMP51884 338 aaPredicted RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 GMFBP60983 142 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 NKX6-1P78426 367 aaPredicted RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 SGO2Q562F6 1265 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 NHSL2Q5HYW2 709 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ATXN7L2Q5T6C5 722 aaPredicted RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 ERMARDQ5T6L9 678 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 MBLAC2Q68D91 279 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ADALQ6DHV7 355 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 TTC19Q6DKK2 380 aaPredicted RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 CYP4F22Q6NT55 531 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 RIPOR1Q6ZS17 1223 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 TAOK1Q7L7X3 1001 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ATG9AQ7Z3C6 839 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 KIF18AQ8NI77 898 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 THOC1Q96FV9 657 aaKnown RBP3.97□□□□□ -1.77
SUB1-202ENST00000502453 MSLNLQ96KJ4 702 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 SSX2IPQ9Y2D8 614 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 ST14Q9Y5Y6 855 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 LYVE1Q9Y5Y7 322 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 CTAGE15A4D2H0 777 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 CCDC169A6NNP5 214 aa3.97□□□□□ -1.77
SUB1-202ENST00000502453 LARGE1O95461 756 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms