RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ZSWIM1Q9BR11 485 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 SLC46A2Q9BY10 475 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 SMOC2Q9H3U7 446 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 ZFP14Q9HCL3 533 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
PRKCB-210ENST00000498739 COMMD8Q9NX08 183 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.71■□□□□ 0.431e-6■■■■□ 24.5
PRKCB-210ENST00000498739 VCANP13611 3396 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 PI4K2BG5E9Z4 385 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 M0QYV0 167 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ECI2O75521 394 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ABL1P00519 1130 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-210ENST00000498739 RFX1P22670 979 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 GNA15P30679 374 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 AVPR1AP37288 418 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 VIPR2P41587 438 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ZXDAP98168 799 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 PDE4CQ08493 712 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-210ENST00000498739 CNGA2Q16280 664 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 FILIP1LQ4L180 1135 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 LCLAT1Q6UWP7 414 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 PIGZQ86VD9 579 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 MON1AQ86VX9 555 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ARID3BQ8IVW6 561 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-210ENST00000498739 CMTM8Q8IZV2 173 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 PDZD8Q8NEN9 1154 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ELSPBP1Q96BH3 223 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 PLA2G2FQ9BZM2 168 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 GANQ9H2C0 597 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 FBXO44Q9H4M3 255 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ACP6Q9NPH0 428 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 ZMYM5Q9UJ78 669 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
PRKCB-210ENST00000498739 DOCK8Q8NF50 2099 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 C2orf78A6NCI8 922 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 TULP2O00295 520 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 FOXN3O00409 490 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 DPYSL4O14531 572 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 XPO1O14980 1071 aaKnown RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 THAP12O43422 761 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 NARSO43776 548 aaKnown RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 SERPINC1P01008 464 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 SETSIPP0DME0 302 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 PPP3CCP48454 512 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 NEK11Q8NG66 645 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 OVCA2Q8WZ82 227 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 ERGIC2Q96RQ1 377 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 NAA15Q9BXJ9 866 aaKnown RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 SMG9Q9H0W8 520 aaKnown RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 TRPV4Q9HBA0 871 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 GMIPQ9P107 970 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 CHORDC1Q9UHD1 332 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-210ENST00000498739 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
PRKCB-210ENST00000498739 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 TRAV19A0A0A6YYK7 116 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 FAM92AA1XBS5 289 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 ZNF840PA6NDX5 716 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 SOBPA7XYQ1 873 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 CYP26A1O43174 497 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 TEX33O43247 280 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 MED7O43513 233 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 PRAMEF12O95522 483 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 CKMP06732 381 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 KIF11P52732 1056 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 POLR2FP61218 127 aaKnown RBP17.68■□□□□ 0.42
PRKCB-210ENST00000498739 PTK2Q05397 1052 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 GRM2Q14416 872 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 PKDCCQ504Y2 493 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 UBALD2Q8IYN6 164 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 ARL14EPQ8N8R7 260 aaPredicted RBP17.68■□□□□ 0.42
PRKCB-210ENST00000498739 ZNF606Q8WXB4 792 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 EDAQ92838 391 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 SECISBP2LQ93073 1101 aaKnown RBP17.68■□□□□ 0.42
PRKCB-210ENST00000498739 E2F7Q96AV8 911 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 CYP2S1Q96SQ9 504 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 STK33Q9BYT3 514 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
PRKCB-210ENST00000498739 NCANO14594 1321 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
PRKCB-210ENST00000498739 OBSL1O75147 1896 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 HEPACAM2A8MVW5 462 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 EPHB6O15197 1021 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 USP17L7P0C7H9 530 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 SRFP11831 508 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 WEE1P30291 646 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 PLA2G4AP47712 749 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 TKTL1P51854 596 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 SMYD5Q6GMV2 418 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 VITQ6UXI7 678 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 FAM71AQ8IYT1 594 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 RSPRY1Q96DX4 576 aa17.67■□□□□ 0.42
PRKCB-210ENST00000498739 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms