RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 MUTYHQ9UIF7 546 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
LMNA-217ENST00000498722 ASB3Q9Y575 518 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 PATJQ8NI35 1801 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 LCA5LO95447 670 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 ASGR2P07307 311 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 GJA1P17302 382 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 CEBPBP17676 345 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
LMNA-217ENST00000498722 PRKCIP41743 596 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 KIF11P52732 1056 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 ETF1P62495 437 aaKnown RBP17.11■□□□□ 0.33
LMNA-217ENST00000498722 APBA1Q02410 837 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 KIAA1328Q86T90 577 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 LEMD2Q8NC56 503 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 TCEAL4Q96EI5 215 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 NT5C1BQ96P26 610 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 ARID3AQ99856 593 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 TSGA10Q9BZW7 698 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 FAM49BQ9NUQ9 324 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
LMNA-217ENST00000498722 CLDN5O00501 218 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 LAMP2P13473 410 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 SOX5P35711 763 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 VPS36Q86VN1 386 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 PPM1KQ8N3J5 372 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 ST13P5Q8NFI4 369 aaPredicted RBP17.1■□□□□ 0.33
LMNA-217ENST00000498722 MCRS1Q96EZ8 462 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 NT5C1AQ9BXI3 368 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 B3GNT5Q9BYG0 378 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 ZNF518BQ9C0D4 1074 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 ZNF334Q9HCZ1 680 aaPredicted RBP17.1■□□□□ 0.33
LMNA-217ENST00000498722 CISHQ9NSE2 258 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 MYO1AQ9UBC5 1043 aa17.1■□□□□ 0.33
LMNA-217ENST00000498722 A0A1W2PRU2 124 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 KRT86O43790 486 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 KIF5CO60282 957 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 FGF19O95750 216 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 CSH1P0DML2 217 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 CSH2P0DML3 217 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 CCDC130P13994 396 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 GABRR2P28476 465 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 CCR2P41597 374 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 MAGEA11P43364 429 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 MFAP3P55082 362 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
LMNA-217ENST00000498722 INCA1Q0VD86 236 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 CUL2Q13617 745 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
LMNA-217ENST00000498722 PRSS36Q5K4E3 855 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 NPAS3Q8IXF0 933 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 KHSRPQ92945 711 aaKnown RBP eCLIP17.09■□□□□ 0.33
LMNA-217ENST00000498722 ATXN3LQ9H3M9 355 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 AVENQ9NQS1 362 aaPredicted RBP17.09■□□□□ 0.33
LMNA-217ENST00000498722 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
LMNA-217ENST00000498722 ZFP37Q9Y6Q3 630 aaPredicted RBP17.09■□□□□ 0.33
LMNA-217ENST00000498722 HELZP42694 1942 aaKnown RBP17.09■□□□□ 0.33
LMNA-217ENST00000498722 TRIOO75962 3097 aa17.08■□□□□ 0.33
LMNA-217ENST00000498722 SLC38A8A6NNN8 435 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 F8VP50 259 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 F8VZ95 297 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 TRIM66O15016 1216 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 DCXO43602 365 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 CILPO75339 1184 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 GFPT2O94808 682 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.32
LMNA-217ENST00000498722 ALADP13716 330 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
LMNA-217ENST00000498722 ADORA2BP29275 332 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 VAV2P52735 878 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 TERF1P54274 439 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 IFRD2Q12894 506 aaPredicted RBP17.08■□□□□ 0.32
LMNA-217ENST00000498722 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 TEAD2Q15562 447 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 ASTE1Q2TB18 679 aaPredicted RBP17.08■□□□□ 0.32
LMNA-217ENST00000498722 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 PHLDB3Q6NSJ2 640 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 SYT10Q6XYQ8 523 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 ENOSF1Q7L5Y1 443 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 IRF2BP2Q7Z5L9 587 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 FAM35AQ86V20 835 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 TMC8Q8IU68 726 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 C12orf29Q8N999 325 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 FAXDC2Q96IV6 333 aa17.08■□□□□ 0.32
LMNA-217ENST00000498722 HEXIM2Q96MH2 286 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms