RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 LPCAT2Q7L5N7 544 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 SYCP3Q8IZU3 236 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 OR5B17Q8NGF7 314 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 WHAMMQ8TF30 809 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 PCED1BQ96HM7 432 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 HPDLQ96IR7 371 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 PNKPQ96T60 521 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 TTLL2Q9BWV7 592 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 OLFML3Q9NRN5 406 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 INTS13Q9NVM9 706 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 F8VP50 259 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 TNFRSF10BO14763 440 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 HYAL3O43820 417 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 ADAM23O75077 832 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 KAT7O95251 611 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 OAS1P00973 400 aaKnown RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 ENGP17813 658 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 ANXA13P27216 316 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 KIR2DL1P43626 348 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 MYO1EQ12965 1108 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 RESTQ13127 1097 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 MAP7D1Q3KQU3 841 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 C8orf34Q49A92 452 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 RHBDF2Q6PJF5 856 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 DPH6Q7L8W6 267 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 BRAPQ7Z569 592 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 HMGB4Q8WW32 186 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 ZCCHC14Q8WYQ9 949 aaKnown RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 ANKRD36BP1Q96IX9 119 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 SPACA7Q96KW9 195 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 CEP295NLQ96MC4 621 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 NUSAP1Q9BXS6 441 aaKnown RBP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 FSCN3Q9NQT6 498 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 BCCIPQ9P287 314 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRAF4-212ENST00000498540 CFAP97Q9P2B7 532 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 NME7Q9Y5B8 376 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 PCDHB13Q9Y5F0 798 aa15.69■□□□□ 0.1
TRAF4-212ENST00000498540 PCDH15Q96QU1 1955 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 SPAARA0A1B0GVQ0 90 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 TRIM66O15016 1216 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 MAP3K13O43283 966 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 PRPF6O94906 941 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 ABL1P00519 1130 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 APODP05090 189 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 IDEP14735 1019 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 WARSP23381 471 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 EIF2DP41214 584 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 CACNA2D1P54289 1103 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 MAPRE1Q15691 268 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 MDH1BQ5I0G3 518 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 RRAGBQ5VZM2 374 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 GPD1LQ8N335 351 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 KIAA1958Q8N8K9 716 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 MYCBPAPQ8TBZ2 947 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 POLMQ9NP87 494 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 ARHGEF4Q9NR80 690 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 CCDC39Q9UFE4 941 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 FBXO2Q9UK22 296 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-212ENST00000498540 KLK13Q9UKR3 277 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 CLIC4Q9Y696 253 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 DMXL2Q8TDJ6 3036 aa15.68■□□□□ 0.1
TRAF4-212ENST00000498540 TCRBV21S2A2A0A5A6 115 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 FRMD3A2A2Y4 597 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 SLC9A3R1O14745 358 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 ADH1CP00326 375 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 TNNC2P02585 160 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 ADH5P11766 374 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 ITPKAP23677 461 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 TAF10Q12962 218 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 ALCAMQ13740 583 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 EOGTQ5NDL2 527 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 PEAR1Q5VY43 1037 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 LYSMD4Q5XG99 296 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 SLC23A3Q6PIS1 610 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 PIP4P1Q86T03 277 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 CBWD2Q8IUF1 395 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 PHTF2Q8N3S3 785 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 C8orf48Q96LL4 319 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 MMS19Q96T76 1030 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 MRPL45Q9BRJ2 306 aaKnown RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 SLC32A1Q9H598 525 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 PILRBQ9UKJ0 227 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 R3HCC1Q9Y3T6 440 aaKnown RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 NEUROG3Q9Y4Z2 214 aa15.67■□□□□ 0.1
TRAF4-212ENST00000498540 DSPP15924 2871 aaKnown RBP15.67■□□□□ 0.1
TRAF4-212ENST00000498540 A0A0A0MRY4 1105 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 CFIP05156 583 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 MBL2P11226 248 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-212ENST00000498540 GRIA2P42262 883 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 PPP3CCP48454 512 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms