RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MRPS5P82675 430 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 FPGSQ05932 587 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 MTA1Q13330 715 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 DHX34Q14147 1143 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 BTG3Q14201 252 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PDK2Q15119 407 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PAN2Q504Q3 1202 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 C2CD6Q53TS8 623 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TFDP3Q5H9I0 405 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 FUT10Q6P4F1 479 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 OLFML1Q6UWY5 402 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 CLEC20AQ6ZU45 233 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 FAM183BPQ6ZVS7 135 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 STRADAQ7RTN6 431 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PHLDB2Q86SQ0 1253 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 OSTM1Q86WC4 334 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 CEP57Q86XR8 500 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 GPR65Q8IYL9 337 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 EIF1ADQ8N9N8 165 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 SPPL2BQ8TCT7 592 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 HASPINQ8TF76 798 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 FAM149B1Q96BN6 582 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TMEM169Q96HH4 297 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 BTBD6Q96KE9 485 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 ZNF558Q96NG5 402 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 YME1L1Q96TA2 773 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PAAF1Q9BRP4 392 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TTPALQ9BTX7 342 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 B3GNT5Q9BYG0 378 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 ZCWPW1Q9H0M4 648 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 GOLPH3Q9H4A6 298 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 POPDC2Q9HBU9 364 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 CRTAC1Q9NQ79 661 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TMEM59LQ9UK28 342 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 UTP11Q9Y3A2 253 aaKnown RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PCDHB12Q9Y5F1 795 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TIMM13Q9Y5L4 95 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 CCDC151A5D8V7 595 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 PAPSS1O43252 624 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ATP2C2O75185 946 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 RTN3O95197 1032 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 GAS8O95995 478 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ZBED1O96006 694 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 CSF2RAP15509 400 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ZFXP17010 805 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 FGFR3P22607 806 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 PTPN7P35236 360 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SLC11A1P49279 550 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 FNTAP49354 379 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TUFMP49411 452 aaKnown RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 PSEN1P49768 467 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ADIGQ0VDE8 80 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TFDP2Q14188 446 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ELF2Q15723 593 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ARL13BQ3SXY8 428 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SLC25A52Q3SY17 297 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TMCO3Q6UWJ1 677 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SYDE1Q6ZW31 735 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 BZW1Q7L1Q6 419 aaKnown RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TADA2BQ86TJ2 420 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SLC13A5Q86YT5 568 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 KCTD6Q8NC69 237 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 PHOSPHO2Q8TCD6 241 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 CCHCR1Q8TD31 782 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TEKT4Q8WW24 435 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 RXFP2Q8WXD0 754 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TSC1Q92574 1164 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 MYLPFQ96A32 169 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 MS4A14Q96JA4 679 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 PKNOX2Q96KN3 472 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 C8orf48Q96LL4 319 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SLC9A7Q96T83 725 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 LBHD1Q9BQE6 289 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 FERMT1Q9BQL6 677 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 FAM129AQ9BZQ8 928 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 MCOLN1Q9GZU1 580 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 ARFGAP3Q9NP61 516 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SPG21Q9NZD8 308 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 HSFX1Q9UBD0 423 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 DNAJB4Q9UDY4 337 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 CHORDC1Q9UHD1 332 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-210ENST00000498259 CYTH4Q9UIA0 394 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 USP18Q9UMW8 372 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 RWDD3Q9Y3V2 267 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 INSL6Q9Y581 213 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 BACE2Q9Y5Z0 518 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 SCN1AP35498 2009 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 HTTP42858 3142 aa8.85□□□□□ -0.99
SF3A1-210ENST00000498259 TRIP11Q15643 1979 aa8.84□□□□□ -0.99
SF3A1-210ENST00000498259 TDRD15B5MCY1 1934 aaKnown RBP8.84□□□□□ -0.99
SF3A1-210ENST00000498259 TRIM43BA6NCK2 446 aa8.84□□□□□ -0.99
SF3A1-210ENST00000498259 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
SF3A1-210ENST00000498259 ZNF487B1APH4 448 aa8.84□□□□□ -0.99
SF3A1-210ENST00000498259 F8VP50 259 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms