RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 OSBPL8Q9BZF1 889 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PPP1R12CQ9BZL4 782 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ACBD3Q9H3P7 528 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ZWILCHQ9H900 591 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 EPB41L5Q9HCM4 733 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CRTAC1Q9NQ79 661 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 GDF3Q9NR23 364 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ASNSD1Q9NWL6 643 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 TMEM161AQ9NX61 479 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 AMACRQ9UHK6 382 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CDH9Q9ULB4 789 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 TIMM13Q9Y5L4 95 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 NUP205Q92621 2012 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 hCG_1818297A0A087WSY0 165 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 PI4K2BG5E9Z4 385 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 TMEM189-UBE2V1I3L0A0 370 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 M0QZQ0 153 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CLDN5O00501 218 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 PAPSS1O43252 624 aaPredicted RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ATP8B1O43520 1251 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 B4GALT3O60512 393 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ATP2C2O75185 946 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 AP1G2O75843 785 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC34A2O95436 690 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ECEL1O95672 775 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CYP11A1P05108 521 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 GLI1P08151 1106 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 PTPN7P35236 360 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 COPS2P61201 443 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 TSPY1Q01534 308 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 DSC1Q08554 894 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CUL1Q13616 776 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ACAP1Q15027 740 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 LLGL1Q15334 1064 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 C15orf59Q2T9L4 293 aaPredicted RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 TRIM60Q495X7 471 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 OVOS1Q6IE37 1185 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 EMBQ6PCB8 327 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CCDC137Q6PK04 289 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CLEC20AQ6ZU45 233 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC26A9Q7LBE3 791 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 HDXQ7Z353 690 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 JAMLQ86YT9 394 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CCDC105Q8IYK2 499 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 GRK7Q8WTQ7 553 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CLEC4CQ8WTT0 213 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 RXFP2Q8WXD0 754 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 RSPH1Q8WYR4 309 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 HSFY1Q96LI6 401 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 CNPY3Q9BT09 278 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 DUSP16Q9BY84 665 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 DPH5Q9H2P9 285 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 HIPK3Q9H422 1215 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 ELAC1Q9H777 363 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 LRRC4Q9HBW1 653 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 NGRNQ9NPE2 291 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 TBC1D13Q9NVG8 400 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 PRG3Q9Y2Y8 225 aaPredicted RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 UTP11Q9Y3A2 253 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 NR2E1Q9Y466 385 aa8.47□□□□□ -1.05
PDZRN3-212ENST00000498048 DCDC2CA8MYV0 355 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 F8W810 466 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FSCN2O14926 492 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HOXA2O43364 376 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HSF2BPO75031 334 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 SASH3O75995 380 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 GAS8O95995 478 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 ITGB1P05556 798 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 RARAP10276 462 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 COL6A1P12109 1028 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PDGFRAP16234 1089 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TYMPP19971 482 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 IGFBP6P24592 240 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 MIPP30301 263 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCK1P35558 622 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 COILP38432 576 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 OR1G1P47890 313 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 CARSP49589 748 aaKnown RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 BCAR1P56945 870 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 ATP11AP98196 1134 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 KRT17Q04695 432 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 KLF1Q13351 362 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 NNTQ13423 1086 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 CASP8Q14790 479 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PPP1R7Q15435 360 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TFDP3Q5H9I0 405 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 KIAA0319Q5VV43 1072 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms