RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 PPP3CCP48454 512 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 NOP14P78316 857 aaKnown RBP23.21■■□□□ 1.31
CLIC4-204ENST00000497755 EMC10Q5UCC4 262 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 FAM173BQ6P4H8 233 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 CCDC73Q6ZRK6 1079 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 ALLCQ8N6M5 410 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 IL17RCQ8NAC3 791 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 TXNDC5Q8NBS9 432 aaKnown RBP23.21■■□□□ 1.31
CLIC4-204ENST00000497755 GLIS3Q8NEA6 775 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 C8orf48Q96LL4 319 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 MMS19Q96T76 1030 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 SMPD4Q9NXE4 827 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 EHD2Q9NZN4 543 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 CPQQ9Y646 472 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 AKAP13Q12802 2813 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 F8VP50 259 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 SGK1O00141 431 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 SCAMP3O14828 347 aaKnown RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 TRIM66O15016 1216 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 OAS1P00973 400 aaKnown RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 CST3P01034 146 aaPredicted RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 GNL1P36915 607 aaPredicted RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 P2RY2P41231 377 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 STAT6P42226 847 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 SURF1Q15526 300 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 C12orf40Q86WS4 652 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 FRMD1Q8N878 549 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 KDF1Q8NAX2 398 aaPredicted RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 FNBP1Q96RU3 617 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 PNKPQ96T60 521 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 MRPL45Q9BRJ2 306 aaKnown RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 TMEM121BQ9BXQ6 578 aaPredicted RBP23.2■■□□□ 1.3
CLIC4-204ENST00000497755 ZMIZ1Q9ULJ6 1067 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 ZFYVE26Q68DK2 2539 aa23.2■■□□□ 1.3
CLIC4-204ENST00000497755 SLC9A3R1O14745 358 aaPredicted RBP23.19■■□□□ 1.3
CLIC4-204ENST00000497755 ALDH1A2O94788 518 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 KAT7O95251 611 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 KLF8O95600 359 aaPredicted RBP23.19■■□□□ 1.3
CLIC4-204ENST00000497755 ABL1P00519 1130 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 HOXD13P35453 343 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 TIE1P35590 1138 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 KIR2DL1P43626 348 aaPredicted RBP23.19■■□□□ 1.3
CLIC4-204ENST00000497755 CACNA2D1P54289 1103 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 CEBPZQ03701 1054 aaKnown RBP23.19■■□□□ 1.3
CLIC4-204ENST00000497755 TAF10Q12962 218 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 MDH1BQ5I0G3 518 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 TRAPPC11Q7Z392 1133 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 HPS3Q969F9 1004 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 TMEM30AQ9NV96 361 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 CFAP97Q9P2B7 532 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 EVLQ9UI08 416 aaPredicted RBP23.19■■□□□ 1.3
CLIC4-204ENST00000497755 ATRXP46100 2492 aa23.19■■□□□ 1.3
CLIC4-204ENST00000497755 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 EIF2DP41214 584 aaKnown RBP23.18■■□□□ 1.3
CLIC4-204ENST00000497755 UAP1L1Q3KQV9 507 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 LPCAT2Q7L5N7 544 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 HS2ST1Q7LGA3 356 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 WDR49Q8IV35 697 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 CCDC65Q8IXS2 484 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 TMEFF1Q8IYR6 380 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 SNX25Q9H3E2 840 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 TMEM74BQ9NUR3 256 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 HSPBP1Q9NZL4 362 aa23.18■■□□□ 1.3
CLIC4-204ENST00000497755 MBD1Q9UIS9 605 aaPredicted RBP23.18■■□□□ 1.3
CLIC4-204ENST00000497755 TNFRSF10BO14763 440 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 ADAM23O75077 832 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 TACC1O75410 805 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 APODP05090 189 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 FAM163BP0C2L3 166 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 PTPN1P18031 435 aaKnown RBP23.17■■□□□ 1.3
CLIC4-204ENST00000497755 PTGER3P43115 390 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 RESTQ13127 1097 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 MAP7D1Q3KQU3 841 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 HSF5Q4G112 596 aaPredicted RBP23.17■■□□□ 1.3
CLIC4-204ENST00000497755 TRIM61Q5EBN2 209 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 TDRD10Q5VZ19 366 aaKnown RBP23.17■■□□□ 1.3
CLIC4-204ENST00000497755 DEFB124Q8NES8 71 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 WHAMMQ8TF30 809 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 ADAM33Q9BZ11 813 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 POLMQ9NP87 494 aaPredicted RBP23.17■■□□□ 1.3
CLIC4-204ENST00000497755 ZDHHC4Q9NPG8 344 aa23.17■■□□□ 1.3
CLIC4-204ENST00000497755 MAP3K13O43283 966 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 GRIA2P42262 883 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 TNFRSF4P43489 277 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 LMAN2Q12907 356 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 CUL4AQ13619 759 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 EOGTQ5NDL2 527 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 SYT12Q8IV01 421 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 OR6B3Q8NGW1 331 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 SCNM1Q9BWG6 230 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 ZNF518BQ9C0D4 1074 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 DPEP3Q9H4B8 488 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 KIAA1586Q9HCI6 787 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 ARHGEF4Q9NR80 690 aa23.16■■□□□ 1.3
CLIC4-204ENST00000497755 CIZ1Q9ULV3 898 aaPredicted RBP23.16■■□□□ 1.3
CLIC4-204ENST00000497755 TNRC6BQ9UPQ9 1833 aaKnown RBP23.16■■□□□ 1.3
CLIC4-204ENST00000497755 ADH1CP00326 375 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 MBL2P11226 248 aaPredicted RBP23.15■■□□□ 1.3
CLIC4-204ENST00000497755 ADH5P11766 374 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 SLC39A14Q15043 492 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms