RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 NANOGP1Q8N7R0 232 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 C16orf52Q8NHV5 167 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 PPP2R3CQ969Q6 453 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 AIFM3Q96NN9 605 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 C17orf80Q9BSJ5 609 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 RHOBTB2Q9BYZ6 727 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 MS4A7Q9GZW8 240 aaPredicted RBP4.31□□□□□ -1.72
CBX3-208ENST00000497498 TRNAU1APQ9NX07 287 aaKnown RBP4.31□□□□□ -1.72
CBX3-208ENST00000497498 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.31□□□□□ -1.72
CBX3-208ENST00000497498 PNMA8BQ9ULN7 279 aaPredicted RBP4.31□□□□□ -1.72
CBX3-208ENST00000497498 SOCS2O14508 198 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 INSIG1O15503 277 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 PMPCBO75439 489 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 UBXN7O94888 489 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 GKP32189 559 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 POLGP54098 1239 aaPredicted RBP4.3□□□□□ -1.72
CBX3-208ENST00000497498 PRKAG1P54619 331 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 TWIST1Q15672 202 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 PTPROQ16827 1216 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 PTCHD3Q3KNS1 767 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 CERCAMQ5T4B2 595 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 B3GNT9Q6UX72 402 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 DAAM2Q86T65 1068 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 OR6B3Q8NGW1 331 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.3□□□□□ -1.72
CBX3-208ENST00000497498 TMEM171Q8WVE6 324 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 NT5C1BQ96P26 610 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 MMS19Q96T76 1030 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 EFHD1Q9BUP0 239 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 GBA2Q9HCG7 927 aaPredicted RBP4.3□□□□□ -1.72
CBX3-208ENST00000497498 XPNPEP3Q9NQH7 507 aa4.3□□□□□ -1.72
CBX3-208ENST00000497498 A0A1W2PPL8 197 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 TMEM232C9JQI7 657 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 M0R3H8 397 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 DSCR3O14972 297 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 MT-CO3P00414 261 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 AGFG1P52594 562 aaKnown RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 BCAT1P54687 386 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 HTRA4P83105 476 aaPredicted RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 CCNIQ14094 377 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 ZNF268Q14587 947 aaPredicted RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 CRELD2Q6UXH1 353 aaPredicted RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 RAB11FIP4Q86YS3 637 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 SAMD14Q8IZD0 417 aaPredicted RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 NRACQ8N912 160 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 SLC35G2Q8TBE7 412 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 PNISRQ8TF01 805 aaKnown RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 RAPGEF4Q8WZA2 1011 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 ZMAT3Q9HA38 289 aaKnown RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 NMRK2Q9NPI5 230 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 ZSCAN32Q9NX65 697 aa4.29□□□□□ -1.72
CBX3-208ENST00000497498 DRG1Q9Y295 367 aaKnown RBP4.29□□□□□ -1.72
CBX3-208ENST00000497498 LY6G6EA0A0G2JKS1 128 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 PSMD9O00233 223 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 GCATO75600 419 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 ALDH1L1O75891 902 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 CT47B1P0C2W7 299 aaPredicted RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 PHKG2P15735 406 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 HSPA6P17066 643 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 EN2P19622 333 aaPredicted RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 SUMO2P61956 95 aaKnown RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 MCL1Q07820 350 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 LMAN2Q12907 356 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 SLC13A2Q13183 592 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 PIN1Q13526 163 aaPredicted RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 RAB32Q13637 225 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 RAPGEF1Q13905 1077 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 MLC1Q15049 377 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 LRRC41Q15345 812 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 TMEM63BQ5T3F8 832 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 SHC4Q6S5L8 630 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 IRF2BP2Q7Z5L9 587 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 LINC01465Q8N7H1 131 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 GPATCH3Q96I76 525 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 VCPIP1Q96JH7 1222 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 CCDC17Q96LX7 622 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 TAAR9Q96RI9 348 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 ACO2Q99798 780 aaKnown RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 TRIM5Q9C035 493 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 ATP6V0A4Q9HBG4 840 aa4.28□□□□□ -1.72
CBX3-208ENST00000497498 TYW1Q9NV66 732 aaKnown RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 NOP58Q9Y2X3 529 aaKnown RBP4.28□□□□□ -1.72
CBX3-208ENST00000497498 E2F8A0AVK6 867 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 MYMKA6NI61 221 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 TMEM233B4DJY2 109 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 CES2O00748 559 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 PHGDHO43175 533 aaKnown RBP4.27□□□□□ -1.73
CBX3-208ENST00000497498 TBC1D4O60343 1298 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 TMEM191BP0C7N4 346 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 KITP10721 976 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 APEHP13798 732 aaKnown RBP4.27□□□□□ -1.73
CBX3-208ENST00000497498 DIO1P49895 249 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 LINC00205P59089 165 aa4.27□□□□□ -1.73
CBX3-208ENST00000497498 GHRHRQ02643 423 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms