RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 PSMC2P35998 433 aaKnown RBP13.15□□□□□ -0.3
CLDN12-213ENST00000496677 PRCPP42785 496 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 CXCL12P48061 93 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 GCLMP48507 274 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 CCR3P51677 355 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 NDST1P52848 882 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 SLC7A9P82251 487 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 INCA1Q0VD86 236 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 EML3Q32P44 896 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 ACOT1Q86TX2 421 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
CLDN12-213ENST00000496677 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 KIAA1958Q8N8K9 716 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 SH3RF2Q8TEC5 729 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 SMOQ99835 787 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 EPC1Q9H2F5 836 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
CLDN12-213ENST00000496677 BEST1O76090 585 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 CKMP06732 381 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 P4HA1P13674 534 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 HOXA6P31267 233 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 HOXC13P31276 330 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 GTF2H1P32780 548 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 GJA4P35212 333 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 PDE6CP51160 858 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 GALK1P51570 392 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 DMWDQ09019 674 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 GAB4Q2WGN9 574 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
CLDN12-213ENST00000496677 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
CLDN12-213ENST00000496677 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
CLDN12-213ENST00000496677 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
CLDN12-213ENST00000496677 SCAMP5Q8TAC9 235 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 OVCA2Q8WZ82 227 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 CYP3A43Q9HB55 503 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 DUS2Q9NX74 493 aaKnown RBP13.14□□□□□ -0.31
CLDN12-213ENST00000496677 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 WNT6Q9Y6F9 365 aa13.14□□□□□ -0.31
CLDN12-213ENST00000496677 LEFTY2O00292 366 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 CCDC130P13994 396 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 YWHAQP27348 245 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 PGFP49763 221 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 NRLP54845 237 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 ORC1Q13415 861 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 RUBCNQ92622 972 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
CLDN12-213ENST00000496677 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
CLDN12-213ENST00000496677 CHURC1-FNTBB4DL54 471 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 AP1G2O75843 785 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 EGFP01133 1207 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 KRT13P13646 458 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 IFNAR2P48551 515 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 SLC5A3P53794 718 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 AMPD2Q01433 879 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLDN12-213ENST00000496677 KRT39Q6A163 491 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 ANKRD40Q6AI12 368 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 ADGRG2Q8IZP9 1017 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 CPA6Q8N4T0 437 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 DCLK2Q8N568 766 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 FAXDC2Q96IV6 333 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 SLITRK1Q96PX8 696 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 MED10Q9BTT4 135 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.313e-16■■■■■ 205
CLDN12-213ENST00000496677 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms