RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ATP2A3Q93084 1043 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 EXOC4Q96A65 974 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 PCED1BQ96HM7 432 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 MRPL45Q9BRJ2 306 aaKnown RBP15.33■□□□□ 0.04
CXCL12-208ENST00000496375 RTKNQ9BST9 563 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 KIAA1468Q9P260 1216 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 SLC8A2Q9UPR5 921 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 NME7Q9Y5B8 376 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 SPTBN2O15020 2390 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 TRIM66O15016 1216 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 MAPK13O15264 365 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 TACC1O75410 805 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 HDCP19113 662 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 BMP6P22004 513 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 PRCPP42785 496 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 USP46P62068 366 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 CSRP2Q16527 193 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 EML3Q32P44 896 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 WDR72Q3MJ13 1102 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 PRR23CQ6ZRP0 262 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 ZC3H3Q8IXZ2 948 aaKnown RBP15.32■□□□□ 0.04
CXCL12-208ENST00000496375 MYCBPAPQ8TBZ2 947 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 GPT2Q8TD30 523 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 GAB3Q8WWW8 586 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 POLR3BQ9NW08 1133 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-208ENST00000496375 TRPM5Q9NZQ8 1165 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 ARHGAP26Q9UNA1 814 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 SPAG17Q6Q759 2223 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 SDK1Q7Z5N4 2213 aa15.32■□□□□ 0.04
CXCL12-208ENST00000496375 CCDC163A0A0D9SF12 145 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 DCDC2BA2VCK2 349 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 F8VP50 259 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 NR3C1P04150 777 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 TCF3P15923 654 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 PTPN1P18031 435 aaKnown RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 PDE6CP51160 858 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 ENPEPQ07075 957 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 TRPC3Q13507 836 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 RBM43Q6ZSC3 357 aaKnown RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 SMYD4Q8IYR2 804 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 RPLP0P6Q8NHW5 317 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 NETO1Q8TDF5 533 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 ZNF516Q92618 1163 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 CD101Q93033 1021 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 TTLL2Q9BWV7 592 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 GZF1Q9H116 711 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 LINC00597Q9H2U6 94 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 DPEP3Q9H4B8 488 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 EHD2Q9NZN4 543 aa15.31■□□□□ 0.04
CXCL12-208ENST00000496375 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
CXCL12-208ENST00000496375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-208ENST00000496375 LEFTY2O00292 366 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 AXIN1O15169 862 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
CXCL12-208ENST00000496375 NFATC1O95644 943 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 STAU1O95793 577 aaKnown RBP15.3■□□□□ 0.04
CXCL12-208ENST00000496375 MBD3O95983 291 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 FAM163BP0C2L3 166 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 CCDC192P0DO97 292 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 PFKLP17858 780 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 CACNA2D1P54289 1103 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 MYL6P60660 151 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 CLDN10P78369 228 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 ZXDBP98169 803 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 EML5Q05BV3 1969 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 LRRC63Q05C16 580 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 NR1H3Q13133 447 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 EZH1Q92800 747 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-208ENST00000496375 C8orf48Q96LL4 319 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 HHIPQ96QV1 700 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 MAPK8IP1Q9UQF2 711 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 MYO16Q9Y6X6 1858 aa15.3■□□□□ 0.04
CXCL12-208ENST00000496375 KIAA1549LQ6ZVL6 1849 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 ZNF840PA6NDX5 716 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 A8MXQ7 604 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 PPP1R3GB7ZBB8 358 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 SLC30A4O14863 429 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 GDF9O60383 454 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 EXOC3O60645 756 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 PHACTR2O75167 634 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 ABL1P00519 1130 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 ATICP31939 592 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 PPP3CCP48454 512 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 CASP4P49662 377 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
CXCL12-208ENST00000496375 KBTBD6Q86V97 674 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 CAMKK1Q8N5S9 505 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 SYAP1Q96A49 352 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-208ENST00000496375 DHTKD1Q96HY7 919 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-208ENST00000496375 ZNF518BQ9C0D4 1074 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 ELOVL4Q9GZR5 314 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 RNF38Q9H0F5 515 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 XYLT2Q9H1B5 865 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms