RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ASTLQ6HA08 431 aaPredicted RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 TMEM270Q6UE05 265 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 PAQR9Q6ZVX9 377 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 TMEM150AQ86TG1 271 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 WHAMMQ8TF30 809 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 INTS2Q9H0H0 1204 aaKnown RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 CSNK1G1Q9HCP0 422 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 PNPLA8Q9NP80 782 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 MRPS17Q9Y2R5 130 aaKnown RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 PCDHB4Q9Y5E5 795 aa17.32■□□□□ 0.36
SF3A1-209ENST00000496189 NUP210Q8TEM1 1887 aaPredicted RBP17.32■□□□□ 0.36
SF3A1-209ENST00000496189 GTPBP10A4D1E9 387 aaKnown RBP17.31■□□□□ 0.36
SF3A1-209ENST00000496189 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 HDCP19113 662 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 CLCN5P51795 746 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 RAD23BP54727 409 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 MFAP3P55082 362 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 USP46P62068 366 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 FCHO2Q0JRZ9 810 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 ZNF268Q14587 947 aaPredicted RBP17.31■□□□□ 0.36
SF3A1-209ENST00000496189 PPP1R26Q5T8A7 1209 aaPredicted RBP17.31■□□□□ 0.36
SF3A1-209ENST00000496189 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 PHLDB3Q6NSJ2 640 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 CLEC20AQ6ZU45 233 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 ENOSF1Q7L5Y1 443 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 GPIHBP1Q8IV16 184 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 SLC4A11Q8NBS3 891 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 TTC16Q8NEE8 873 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 SMOQ99835 787 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 DUSP16Q9BY84 665 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 NACA2Q9H009 215 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 KCNH6Q9H252 994 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 NDST4Q9H3R1 872 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 TBC1D17Q9HA65 648 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 TRPV5Q9NQA5 729 aa17.31■□□□□ 0.36
SF3A1-209ENST00000496189 MAN2B1O00754 1011 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 TADA3O75528 432 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 PDGFBP01127 241 aaPredicted RBP17.3■□□□□ 0.36
SF3A1-209ENST00000496189 PAEPP09466 180 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 VDRP11473 427 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 NUBP1P53384 320 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 STILQ15468 1287 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 ARHGAP17Q68EM7 881 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 C1orf228Q6PIY5 440 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 POTEHQ6S545 545 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 ZNF852Q6ZMS4 543 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
SF3A1-209ENST00000496189 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
SF3A1-209ENST00000496189 MSANTD3Q96H12 275 aa17.3■□□□□ 0.36
SF3A1-209ENST00000496189 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
SF3A1-209ENST00000496189 TLR8Q9NR97 1041 aaKnown RBP17.3■□□□□ 0.36
SF3A1-209ENST00000496189 MYH10P35580 1976 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 NCANO14594 1321 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 KRBA1A5PL33 1030 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 C2orf78A6NCI8 922 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 ZNF840PA6NDX5 716 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 TNFRSF10BO14763 440 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 NCAM2O15394 837 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 GLULP15104 373 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 AOC1P19801 751 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
SF3A1-209ENST00000496189 AVPR2P30518 371 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 KPNA1P52294 538 aaPredicted RBP17.29■□□□□ 0.36
SF3A1-209ENST00000496189 BCAT1P54687 386 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 TPRG1Q6ZUI0 275 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 RRAGAQ7L523 313 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 SCAMP5Q8TAC9 235 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 LMO3Q8TAP4 145 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 USP13Q92995 863 aaPredicted RBP17.29■□□□□ 0.36
SF3A1-209ENST00000496189 NELL2Q99435 816 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 UBE2TQ9NPD8 197 aaPredicted RBP17.29■□□□□ 0.36
SF3A1-209ENST00000496189 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 TMEM30AQ9NV96 361 aa17.29■□□□□ 0.36
SF3A1-209ENST00000496189 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 MBL2P11226 248 aaPredicted RBP17.28■□□□□ 0.36
SF3A1-209ENST00000496189 KRT5P13647 590 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 STARD6P59095 220 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 AMPD2Q01433 879 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
SF3A1-209ENST00000496189 UBXN2BQ14CS0 331 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 NCAPHQ15003 741 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 GOLGA7BQ2TAP0 167 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 HECTD3Q5T447 861 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 TADA2BQ86TJ2 420 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 ANKRD52Q8NB46 1076 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 RBBP8NLQ8NC74 664 aaPredicted RBP17.28■□□□□ 0.36
SF3A1-209ENST00000496189 ZMIZ2Q8NF64 920 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 CYP2S1Q96SQ9 504 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 C8orf33Q9H7E9 229 aaPredicted RBP17.28■□□□□ 0.36
SF3A1-209ENST00000496189 TAB2Q9NYJ8 693 aa17.28■□□□□ 0.36
SF3A1-209ENST00000496189 TSPAN16Q9UKR8 245 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms