RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TJP3O95049 919 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PDGFRBP09619 1106 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PYGMP11217 842 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PTPN1P18031 435 aaKnown RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 TNNT3P45378 269 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 RABGGTBP53611 331 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 DR1Q01658 176 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 GUCY2DQ02846 1103 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 KRT17Q04695 432 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 EFHC1Q5JVL4 640 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 BEND6Q5SZJ8 279 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 FAM102AQ5T9C2 384 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 SCARA3Q6AZY7 606 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 DCLRE1AQ6PJP8 1040 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 ARCQ7LC44 396 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 MAP7D3Q8IWC1 876 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 CCDC105Q8IYK2 499 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 GPR65Q8IYL9 337 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 UBA3Q8TBC4 463 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 ALG3Q92685 438 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 KRT35Q92764 455 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PPP2R3CQ969Q6 453 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF558Q96NG5 402 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 CPXM1Q96SM3 734 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 GAS2L1Q99501 681 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 MED10Q9BTT4 135 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 FRMD8P1Q9BZ68 369 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 EPC1Q9H2F5 836 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 VIPAS39Q9H9C1 493 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 EPB41L5Q9HCM4 733 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 TBC1D13Q9NVG8 400 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 PCYOX1Q9UHG3 505 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 CDH9Q9ULB4 789 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 L1RE1Q9UN81 338 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 EFR3BQ9Y2G0 817 aa10.77□□□□□ -0.69
HDAC3-214ENST00000495485 YBX2Q9Y2T7 364 aaKnown RBP10.77□□□□□ -0.69
HDAC3-214ENST00000495485 FAM170AA1A519 330 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 H3BNC9 293 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 GABRDO14764 452 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 PPEF2O14830 753 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 XPO1O14980 1071 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 RAD51CO43502 376 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 GAS8O95995 478 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 ALDH2P05091 517 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 FGFR1P11362 822 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 GPD1P21695 349 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 PCK1P35558 622 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SCNN1GP51170 649 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF143P52747 638 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 DRG2P55039 364 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SLC6A3Q01959 620 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 PLCB3Q01970 1234 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SOX4Q06945 474 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 DSC1Q08554 894 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 ELAVL2Q12926 359 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CYP1B1Q16678 543 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 C2CD6Q53TS8 623 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SPOUT1Q5T280 376 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CYP4A22Q5TCH4 519 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 DCAF12L1Q5VU92 463 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CCDC137Q6PK04 289 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 KRT222Q8N1A0 295 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 C12orf50Q8NA57 414 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 B3GALNT2Q8NCR0 500 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CCHCR1Q8TD31 782 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SLC35F5Q8WV83 523 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 KBTBD7Q8WVZ9 684 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 LRRC45Q96CN5 670 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CNPY3Q9BT09 278 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 TSPYL1Q9H0U9 437 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 GDF3Q9NR23 364 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 FAM49BQ9NUQ9 324 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 TMEM51Q9NW97 253 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SMARCAL1Q9NZC9 954 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 HMGXB4Q9UGU5 601 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 CHORDC1Q9UHD1 332 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-214ENST00000495485 SSX2IPQ9Y2D8 614 aa10.76□□□□□ -0.69
HDAC3-214ENST00000495485 TMEM189-UBE2V1I3L0A0 370 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 SOX1O00570 391 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 FBXO21O94952 628 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 KRT1P04264 644 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 PDGFRAP16234 1089 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 ADORA2BP29275 332 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 SDC4P31431 198 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms