RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RASSF9O75901 435 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 KRT7P08729 469 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 ZNF200P98182 395 aaPredicted RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 OTOAQ7RTW8 1153 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 RNF135Q8IUD6 432 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 TEX2Q8IWB9 1127 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 TXLNGQ9NUQ3 528 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 SCN9AQ15858 1988 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 NFKBIEO00221 500 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 MT-CO1P00395 513 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 TPH1P17752 444 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 AMPD1P23109 780 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 ADCYAP1R1P41586 468 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 YWHAEP62258 255 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 PIGHQ14442 188 aaPredicted RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 RAPH1Q70E73 1250 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 ALYREFQ86V81 257 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 ARAP2Q8WZ64 1704 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 LAMA2P24043 3122 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 hCG_1818297A0A087WSY0 165 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 B2RBV5 119 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 DRG2P55039 364 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 TMEM132DQ14C87 1099 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 IGDCC3Q8IVU1 814 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 PYROXD2Q8N2H3 581 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 DDX50Q9BQ39 737 aaKnown RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 ZMYND8Q9ULU4 1186 aaPredicted RBP14.03□□□□□ -0.16
GPC1-209ENST00000495100 USH1CQ9Y6N9 552 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 PPEF2O14830 753 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 MED7O43513 233 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 KDELR1P24390 212 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 SERPINB6P35237 376 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 MYBPC2Q14324 1141 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.16
GPC1-209ENST00000495100 RPAINQ86UA6 219 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 MAP7D3Q8IWC1 876 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 SEC14L1Q92503 715 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 C18orf25Q96B23 403 aaPredicted RBP14.02□□□□□ -0.16
GPC1-209ENST00000495100 MAGEB18Q96M61 343 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 CYTH4Q9UIA0 394 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 SUFUQ9UMX1 484 aa14.02□□□□□ -0.16
GPC1-209ENST00000495100 GOLGA8QA0A0J9YX86 632 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 GOLGA8OA6NCC3 632 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 GOLGA8NF8WBI6 632 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 SLC26A4O43511 780 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 ASS1P00966 412 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 UBTFL6P0CB48 400 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 ZCCHC18P0CG32 403 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 TFE3P19532 575 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 TCN1P20061 433 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 GLRBP48167 497 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 CAV1Q03135 178 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 SLC20A2Q08357 652 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 RWDD4Q6NW29 188 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 TRIM72Q6ZMU5 477 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 PID1Q7Z2X4 250 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 TRABD2AQ86V40 505 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 SCYL1Q96KG9 808 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 NHSL1Q5SYE7 1610 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 MOCS2O96007 188 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 ACO1P21399 889 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 THOC5Q13769 683 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 RCN1Q15293 331 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 CA9Q16790 459 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 RFWD3Q6PCD5 774 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 BRSK2Q8IWQ3 736 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 KATNAL2Q8IYT4 538 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 ZCCHC9Q8N567 271 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 MCUQ8NE86 351 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 CPT1BQ92523 772 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 RAB3IPQ96QF0 476 aaPredicted RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 LGMNQ99538 433 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 TBC1D10AQ9BXI6 508 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 CDT1Q9H211 546 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 PIN4Q9Y237 131 aaKnown RBP14.02□□□□□ -0.17
GPC1-209ENST00000495100 MFHAS1Q9Y4C4 1052 aa14.02□□□□□ -0.17
GPC1-209ENST00000495100 SPATA31C2B4DYI2 1134 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 LYPLA1O75608 230 aaPredicted RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 IVDP26440 423 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 NR1H3Q13133 447 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 POTEAQ6S8J7 498 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 EXT2Q93063 718 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 ATXN3LQ9H3M9 355 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 NKX1-2Q9UD57 310 aaPredicted RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 CHKBQ9Y259 395 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms