RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ARL14EPQ8N8R7 260 aaPredicted RBP16.85■□□□□ 0.29
LIME1-209ENST00000494776 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 BPIFB1Q8TDL5 484 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 CSGALNACT1Q8TDX6 532 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 KAT5Q92993 513 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 RSPRY1Q96DX4 576 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 CYP2S1Q96SQ9 504 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 NDST4Q9H3R1 872 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 KIF9Q9HAQ2 790 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 TDP1Q9NUW8 608 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 HESX1Q9UBX0 185 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
LIME1-209ENST00000494776 KIAA1257Q9ULG3 409 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 TECTAO75443 2155 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 GTPBP10A4D1E9 387 aaKnown RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 KRBA1A5PL33 1030 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 PAEPP09466 180 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 KRT5P13647 590 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 SLC9A1P19634 815 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 ACO1P21399 889 aaKnown RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 MFAP3P55082 362 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 TYRO3Q06418 890 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 MLF2Q15773 248 aaPredicted RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 GOLGA7BQ2TAP0 167 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 ARHGAP17Q68EM7 881 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 CC2D1AQ6P1N0 951 aaPredicted RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 UBR7Q8N806 425 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 OVCA2Q8WZ82 227 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 DNASE1L2Q92874 299 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 FAM81BQ96LP2 452 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
LIME1-209ENST00000494776 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
LIME1-209ENST00000494776 NCANO14594 1321 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 CHADO15335 359 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 PFKLP17858 780 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 MYL5Q02045 173 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 FCHO2Q0JRZ9 810 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 ZNF268Q14587 947 aaPredicted RBP16.83■□□□□ 0.28
LIME1-209ENST00000494776 ARHGAP29Q52LW3 1261 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 ENOSF1Q7L5Y1 443 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 ANKRD52Q8NB46 1076 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 RBBP8NLQ8NC74 664 aaPredicted RBP16.83■□□□□ 0.28
LIME1-209ENST00000494776 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 SLC22A12Q96S37 553 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 TBC1D17Q9HA65 648 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 TLR8Q9NR97 1041 aaKnown RBP16.83■□□□□ 0.28
LIME1-209ENST00000494776 GMIPQ9P107 970 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 APEX2Q9UBZ4 518 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 CCL26Q9Y258 94 aa16.83■□□□□ 0.28
LIME1-209ENST00000494776 LETM1O95202 739 aaPredicted RBP16.82■□□□□ 0.28
LIME1-209ENST00000494776 CDK11BP21127 795 aaKnown RBP16.82■□□□□ 0.28
LIME1-209ENST00000494776 PON1P27169 355 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 USP8P40818 1118 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 BCAT1P54687 386 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 PRKCQQ04759 706 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 ARHGAP44Q17R89 818 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 ASTLQ6HA08 431 aaPredicted RBP16.82■□□□□ 0.28
LIME1-209ENST00000494776 GPRIN1Q7Z2K8 1008 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 ZFYVE19Q96K21 471 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 KREMEN1Q96MU8 473 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 LRRC3BQ96PB8 259 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 NACA2Q9H009 215 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 KCNH6Q9H252 994 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 HEBP1Q9NRV9 189 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 FANCLQ9NW38 375 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 TAB2Q9NYJ8 693 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 IL37Q9NZH6 218 aa16.82■□□□□ 0.28
LIME1-209ENST00000494776 GREB1Q4ZG55 1949 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 HHLA1C9JL84 531 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 RNF225M0QZC1 329 aaPredicted RBP16.81■□□□□ 0.28
LIME1-209ENST00000494776 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
LIME1-209ENST00000494776 AVPR2P30518 371 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 CLCN5P51795 746 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 KPNA1P52294 538 aaPredicted RBP16.81■□□□□ 0.28
LIME1-209ENST00000494776 BST2Q10589 180 aaKnown RBP16.81■□□□□ 0.28
LIME1-209ENST00000494776 STILQ15468 1287 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 HECTD3Q5T447 861 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 IER5LQ5T953 404 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 GJB7Q6PEY0 223 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 TPRG1Q6ZUI0 275 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 TTC30AQ86WT1 665 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 UBA3Q8TBC4 463 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 SH3RF2Q8TEC5 729 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 UBXN6Q9BZV1 441 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 VPS16Q9H269 839 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 TRPV5Q9NQA5 729 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 GKN1Q9NS71 199 aa16.81■□□□□ 0.28
LIME1-209ENST00000494776 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms