RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TRIM66O15016 1216 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 OAS1P00973 400 aaKnown RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 RPN1P04843 607 aaKnown RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 CCDC130P13994 396 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TCF3P15923 654 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 HDCP19113 662 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ANXA13P27216 316 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ATICP31939 592 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 OPRD1P41143 372 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ASPAP45381 313 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 IFNAR2P48551 515 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 NRLP54845 237 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 DPYDQ12882 1025 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TAF10Q12962 218 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ZACNQ401N2 412 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 SYNPOQ8N3V7 929 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ZMIZ2Q8NF64 920 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 SCAMP5Q8TAC9 235 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 HHIPQ96QV1 700 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 TWNKQ96RR1 684 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
VTI1A-208ENST00000494728 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 PDXKO00764 312 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 TNFRSF10BO14763 440 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 PHACTR2O75167 634 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 AKAP3O75969 853 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 BEST1O76090 585 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 CYP17A1P05093 508 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 SYKP43405 635 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 KRT85P78386 507 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 SLC7A9P82251 487 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTI1A-208ENST00000494728 SIM2Q14190 667 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-208ENST00000494728 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 LAIR1Q6GTX8 287 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 FILIP1Q7Z7B0 1213 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 WDR5BQ86VZ2 330 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 C12orf40Q86WS4 652 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 FAM160A2Q8N612 972 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-208ENST00000494728 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 RPLP0P6Q8NHW5 317 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 ATP2A3Q93084 1043 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 WBP2Q969T9 261 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 P2RY13Q9BPV8 354 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
VTI1A-208ENST00000494728 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 CPQQ9Y646 472 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 CEP192Q8TEP8 1941 aa12.38□□□□□ -0.43
VTI1A-208ENST00000494728 AKAP13Q12802 2813 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 RHOBTB3O94955 611 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 CLSTN1O94985 981 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 ASS1P00966 412 aaKnown RBP12.37□□□□□ -0.43
VTI1A-208ENST00000494728 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 HOXA6P31267 233 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 NDST1P52848 882 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 SLC5A3P53794 718 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 PSMD2Q13200 908 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 ZCWPW2Q504Y3 356 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 KRBA2Q6ZNG9 492 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 DGLUCYQ7Z3D6 616 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-208ENST00000494728 C12orf29Q8N999 325 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 TAS1R2Q8TE23 839 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 CD101Q93033 1021 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 CEP295NLQ96MC4 621 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 SMOQ99835 787 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 FAM49BQ9NUQ9 324 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 GMEB2Q9UKD1 530 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
VTI1A-208ENST00000494728 ZFHX4Q86UP3 3567 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 COCHO43405 550 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 ABL1P00519 1130 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 RETP07949 1114 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 FAM163BP0C2L3 166 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms