RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KIF9Q9HAQ2 790 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 SLC24A3Q9HC58 644 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 NCDNQ9UBB6 729 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 TRAF3IP3Q9Y228 551 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 MYO16Q9Y6X6 1858 aa10.21□□□□□ -0.78
MSH5-218ENST00000494646 ZNF840PA6NDX5 716 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 K7ESF4 209 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 LEFTY2O00292 366 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 TRDMT1O14717 391 aaKnown RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 HRO43593 1189 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 AKAP3O75969 853 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 KIF20AO95235 890 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 HLA-DRAP01903 254 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 TRIM49P0CI25 452 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 TRIM49CP0CI26 452 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 YWHAQP27348 245 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 GCLMP48507 274 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 PXNP49023 591 aaPredicted RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 VAMP7P51809 220 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 NDST1P52848 882 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 GRSF1Q12849 480 aaKnown RBP eCLIP10.2□□□□□ -0.78
MSH5-218ENST00000494646 PNOCQ13519 176 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 PDGFRLQ15198 375 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 EML3Q32P44 896 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 ZACNQ401N2 412 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 TMEM196Q5HYL7 178 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 FSTL4Q6MZW2 842 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 GPR179Q6PRD1 2367 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 PRR23BQ6ZRT6 265 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 C12orf29Q8N999 325 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 SCAMP5Q8TAC9 235 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 MYO18AQ92614 2054 aaKnown RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 ERCC4Q92889 916 aaPredicted RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 P2RY13Q9BPV8 354 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 FAM126AQ9BYI3 521 aaPredicted RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 ELOVL4Q9GZR5 314 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 VRTNQ9H8Y1 702 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 SMPD4Q9NXE4 827 aa10.2□□□□□ -0.78
MSH5-218ENST00000494646 SMG5Q9UPR3 1016 aaKnown RBP10.2□□□□□ -0.78
MSH5-218ENST00000494646 EML5Q05BV3 1969 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 ANTXRLA6NF34 631 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 IKBKBO14920 756 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 RNF40O75150 1001 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 AP1G2O75843 785 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 BEST1O76090 585 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 KRT13P13646 458 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 P4HA1P13674 534 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 CCDC130P13994 396 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 PSMC2P35998 433 aaKnown RBP10.19□□□□□ -0.78
MSH5-218ENST00000494646 PIK3CAP42336 1068 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 NOP14P78316 857 aaKnown RBP10.19□□□□□ -0.78
MSH5-218ENST00000494646 AMPD2Q01433 879 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 PPP3CAQ08209 521 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 BECN1Q14457 450 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 FAM35AQ86V20 835 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 FAM186BQ8IYM0 893 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 SYNPOQ8N3V7 929 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 GUF1Q8N442 669 aaKnown RBP10.19□□□□□ -0.78
MSH5-218ENST00000494646 CPA6Q8N4T0 437 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 TMEM174Q8WUU8 243 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 CD101Q93033 1021 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 FBXO32Q969P5 355 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 TNIP3Q96KP6 325 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 CEP295NLQ96MC4 621 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 IER2Q9BTL4 223 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 TTLL2Q9BWV7 592 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 EPC1Q9H2F5 836 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 EHD2Q9NZN4 543 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 HMGXB4Q9UGU5 601 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 ARHGAP26Q9UNA1 814 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 CPQQ9Y646 472 aa10.19□□□□□ -0.78
MSH5-218ENST00000494646 SPAG17Q6Q759 2223 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 TNFRSF10BO14763 440 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 RTN3O95197 1032 aaPredicted RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 ASS1P00966 412 aaKnown RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 MBL2P11226 248 aaPredicted RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 CD58P19256 250 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 DRD1P21728 446 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 RPL13P26373 211 aaKnown RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 ADORA2BP29275 332 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 SLC6A11P48066 632 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 PPP3CCP48454 512 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 MAP3K7CLP57077 242 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 USP4Q13107 963 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 NR1H3Q13133 447 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 SIM2Q14190 667 aaPredicted RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 ISM2Q6H9L7 571 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 INTS8Q75QN2 995 aaKnown RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 FILIP1Q7Z7B0 1213 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 LONP2Q86WA8 852 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 ADGRG2Q8IZP9 1017 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 FUKQ8N0W3 1084 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 CRYBG2Q8N1P7 616 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 SLC2A14Q8TDB8 520 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 TAS1R2Q8TE23 839 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 ATP2A3Q93084 1043 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 RMDN1Q96DB5 314 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms